Supplementary Data - A table listing of all published markers and primer information included in this survey.
|
Mutation Name |
Region/STS |
Size (bp) |
Site |
mutation |
Forward Primer |
Reverse Primer |
reference |
|
M2 |
DYS271 |
209 |
168 |
A->G |
aggcactggtcagaatgaag |
aatggaaaatacagctcccc |
Seielstad et al. 1994 |
|
M3 |
DYS199 |
241 |
181 |
C->T |
taatcagtctcctcccagca |
aaaattgtgaatctgaaatttaagg |
Underhill et al. 1996 |
|
M4 |
DYS234 |
273 |
88 |
A->G |
tcctaggttatgattacagagcg |
acgtcttgtaaacatgacaagg |
Underhill et al. 1997 |
|
M5 |
DYS214a |
322 |
73 |
C->T |
gggtttatactgacctgccaatgtt |
ttattgggaactttcagggg |
Underhill et al. 1997 |
|
M6 |
DYS198 |
218 |
37 |
T->C |
cactaccacatttctggttgg |
cgctgagtccattctttgag |
Underhill et al. 1997 |
|
M7 |
DYS253 |
300 |
236 |
C->G |
actgtgagcgagctgaaaat |
gcagccttgtgaaccaatta |
Underhill et al. 1997 |
|
M8 |
DYS263 |
267 |
137 |
G->T |
cccacccacttcagtatgaa |
aggctgacagacaagtccac |
Underhill et al. 1997 |
|
M9 |
G10.35a |
340 |
68 |
C->G |
gcagcatataaaactttcagg |
gcttgagcaaagttaggtttt |
Underhill et al. 1997 |
|
M10 |
G10.10 |
343 |
156 |
T->C |
gcattgctataagttacctgc |
taataaaaattgggtcaccc |
Underhill et al. 1997 |
|
M11 |
G10.37 |
222 |
44 |
A->G |
tctctctgtctgtctctccctcc |
gagcataaacaagaacttactgagc |
Underhill et al. 1997 |
|
M12 |
DYS260a |
309 |
286 |
G->T |
actaaaacaccattagaaacaaagg |
ctgagcaacatagtgacccc |
Underhill et al. 1997 |
|
M13 |
G10.06 |
233 |
157 |
G->C |
tcctaacctggtggtctttc |
tgagccatgattttatccaac |
Underhill et al. 1997 |
|
M14 |
G10.07 |
287 |
180 |
T->C |
agacggttagatcagttctctg |
tagataaaagcacattgacacc |
Underhill et al. 1997 |
|
M15 |
G10.16 |
295 |
304 |
9 bp insertion |
acaaatcctgaacaatcgc |
tgcatgtggttaaaatttcc |
Underhill et al. 1997 |
|
M16 |
DYS214b |
266 |
38 |
C->A |
tgttatgtcatttgaacccag |
ccgtgtgttgctgggctgt |
Underhill et al. 1997 |
|
M17 |
G10.47a |
333 |
68 |
4G->3G |
ctggtcataacactggaaatc |
tgaacctacaaatgtgaaact |
Underhill et al. 1997 |
|
M18 |
G10.47b |
333 |
62 |
2 bp insertion |
ctggtcataacactggaaatc |
tgaacctacaaatgtgaaactc |
Underhill et al. 1997 |
|
M19 |
G10.47c |
333 |
131 |
T->A |
ctggtcataacactggaaatc |
tgaacctacaaatgtgaaactc |
Underhill et al. 1997 |
|
M20 |
G10.48 |
413 |
118 |
A->G |
gattgggtgtcttcagtgct |
cacacaacaaggcaccat |
Underhill et al. 1997 |
|
M21 |
G10.43 |
415 |
357 |
A->T |
cttttatttctgactacaggg |
aacagcagatttgagcagg |
Underhill et al. 1997 |
|
M22 |
DYS273 |
327 |
129 |
A->G |
agaagggtctgaaagcaggt |
gcctactacctggaggctt |
Underhill et al. 1997 |
|
M23 |
G10.57a |
327 |
159 |
A->G |
tctctaacttctgtgagccac |
ggaaaaactaaactctaaatctct |
Underhill et al. 2001 |
|
M25 |
B9.008b |
340 |
121 |
G->C |
aaagcgagagattcaatccag |
ttttagcaagttaagtcaccagc |
Underhill et al. 2001 |
|
M26 |
B9.005 |
321 |
68 |
G->A |
ccagtggtaaagttttattacaattt |
ttcacagtaagcaggcaatcc |
Underhill et al. 2001 |
|
M27 |
G10.65 |
526 |
398 |
C->G |
cggaagtcaaagttatagttactgg |
cactgctgttctgtctaccaca |
Underhill et al. 2001 |
|
M28 |
G10.33n |
332 |
277 |
T->G |
gcttacttgggacacaggct |
agagaagttgtcatacgataatgg |
Underhill et al. 2001 |
|
M30 |
G10.66a |
486 |
132 |
G->A |
gaaccagacaatacgaaatagaag |
tttagcggcttatctcattacc |
Underhill et al. 2001 |
|
M31 |
G10.66b |
486 |
71 |
G->C |
gaaccagacaatacgaaatagaag |
tttagcggcttatctcattacc |
Underhill et al. 2001 |
|
M32 |
G10.68a |
370 |
166 |
T->C |
ttgaaaaaatacagtggaac |
caagtgtttaaggatacaga |
Underhill et al. 2001 |
|
M33 |
G10.68b |
370 |
180 |
A->C |
ttgaaaaaatacagtggaac |
caagtgtttaaggatacaga |
Underhill et al. 2001 |
|
M34 |
G10.69 |
372 |
131 |
G->T |
cacttcacatttgtttttagg |
agtcattatttagtcattccag |
Underhill et al. 2001 |
|
M35 |
G10.72a |
513 |
168 |
G->C |
taagcctaaagagcagtcagag |
agagggagcaatgaggaca |
Underhill et al. 2001 |
|
M36 |
G10.82a |
436 |
74 |
T->G |
agatcatcccaaaacaatcataa |
aaggctgaaatcaatccaatctg |
Underhill et al. 2001 |
|
M37 |
G10.STS 84 |
422 |
203 |
C->T |
cagattggattgatttcagcctt |
agcatacaaaaaaaaaaaactgc |
Underhill et al. 2001 |
|
M38 |
G10.73a |
337 |
146 |
T->G |
cagtttttagagaataatgtcct |
ttaaagaaaagaaaagcagatg |
Underhill et al. 2001 |
|
M39 |
G10.73a |
337 |
236 |
C deletion |
cagtttttagagaataatgtcct |
ttaaagaaaagaaaagcagatg |
Underhill et al. 2001 |
|
M42 |
B9.008a |
340 |
297 |
A->T |
aaagcgagagattcaatccag |
ttttagcaagttaagtcaccagc |
Underhill et al. 2001 |
|
M43 |
DYS260b |
309 |
77 |
A->G |
actaaaacaccattagaaacaaagg |
ctgagcaacatagtgacccc |
Underhill et al. 2001 |
|
M44 |
G10.87 |
389 |
263 |
G->C |
ctggcaccttctgatattttgag |
tgtgatttctatgtgtttgaggac |
Underhill et al. 2001 |
|
M45 |
B9.12 |
352 |
109 |
G->A |
gctggcaagacacttctgag |
aatatgttcctgacaccttcc |
Underhill et al. 2001 |
|
M47 |
G10.82b |
436 |
395 |
G->A |
agatcatcccaaaacaatcataa |
aaggctgaaatcaatccaatctg |
Underhill et al. 2001 |
|
M48 |
G10.79n |
240 |
160 |
A->G |
aaacaatatgtatgctaattttgct |
tcaatgtaaatgttagtataaggatg |
Underhill et al. 2001 |
|
M49 |
B9.15new a |
354 |
229 |
T->C |
cggcaacagtgaggacagt |
tgcttcaggagatagaggctc |
Underhill et al. 2001 |
|
M50 |
B9.15new b |
354 |
175 |
T->C |
cggcaacagtgaggacagt |
tgcttcaggagatagaggctc |
Underhill et al. 2001 |
|
M51 |
B9.16 |
339 |
33 |
G->A |
gagcctctatctcctgaagc |
tgactgctctgttgcgaca |
Underhill et al. 2001 |
|
M52 |
G10.88 |
534 |
477 |
A->C |
actgtagcatggtcatctagggtg |
gacgaagcaaacatttcaagagag |
Underhill et al. 2001 |
|
M54 |
B9.17 |
360 |
164 |
G->A |
cctcctctggtctgggttt |
tgtgtcaggactggttccat |
Underhill et al. 2001 |
|
M55 |
B9.28 |
382 |
228 |
T->C |
cgtaggcgtttgacagcag |
cctttcttcgtaatcctccc |
Underhill et al. 2001 |
|
M56 |
B9.29 |
399 |
39 |
A->T |
ccagaaactgaagtacaaatgc |
tctcattgctgcctctcttt |
Underhill et al. 2001 |
|
M57 |
G10.85n |
326 |
133 |
+1bp |
attgggaggaagtggtttctg |
gttctgtatcttttccattatttgc |
Underhill et al. 2001 |
|
M58 |
G10.57b |
327 |
224 |
G->A |
tctctaacttctgtgagccac |
ggaaaaactaaactctaaatctct |
Underhill et al. 2001 |
|
M59 |
B9.15new c |
354 |
179 |
A->C |
cggcaacagtgaggacagt |
tgcttcaggagatagaggctc |
Underhill et al. 2001 |
|
M60 |
B9.34 |
388 |
242 |
+1bp |
gcactggcgttcatcatct |
atgttcattatggttcaggagg |
Underhill et al. 2001 |
|
M61 |
G10.83new a |
190 |
98 |
C->T |
attggattgatttcagccttc |
attttattttctgtgttccttgc |
Underhill et al. 2001 |
|
M62 |
DYS260c |
309 |
60 |
T->C |
actaaaacaccattagaaacaaagg |
ctgagcaacatagtgacccc |
Underhill et al. 2001 |
|
M63 |
B9.22 |
308 |
43 |
G->A |
ctcttcccttggttcctattc |
ttaggcagaagcatccacc |
Underhill et al. 2001 |
|
M64 |
B9.t23 |
325 |
279 |
A->G recurrent |
tatagaccctgactactcaagagaa |
ggtagccctttccagtctgt |
Underhill et al. 2001 |
|
M65 |
B9.t26 |
436 |
152 |
A->T |
ttctgatgccagcttgttcg |
gctacgggattaaagtaaccttg |
Underhill et al. 2001 |
|
M66 |
B9.41 |
415 |
135 |
A->C |
ctgtgtaacaccatcaagtgc |
acatcttctggagacatacttcc |
Underhill et al. 2001 |
|
M67 |
B9.36new a |
409 |
377 |
A->T |
ccatattctttatactttctacctgc |
gtcttttcacttgttcgtggac |
Underhill et al. 2001 |
|
M68 |
B9.36new b |
409 |
268 |
A->G |
ccatattctttatactttctacctgc |
gtcttttcacttgttcgtggac |
Underhill et al. 2001 |
|
M69 |
B9.62a |
257 |
222 |
T->C |
ggttatcatagcccactatactttg |
atctttattccctttgtcttgct |
Underhill et al. 2001 |
|
M70 |
B9.62b |
257 |
45 |
A->C |
ggttatcatagcccactatactttg |
atctttattccctttgtcttgct |
Underhill et al. 2001 |
|
M71 |
B9.6 3b |
328 |
197 |
C->T |
ttgaattatagtcccttgcctc |
gcttcttttctgtgatggctg |
Underhill et al. 2001 |
|
M72 |
B9.6 3a |
328 |
157 |
A->G |
ttgaattatagtcccttgcctc |
gcttcttttctgtgatggctg |
Underhill et al. 2001 |
|
M73 |
B9.47a |
361 |
260 |
2bp deletion |
cagaataataggagaatttttggt |
attttccttattttctaagcagc |
Underhill et al. 2001 |
|
M74 |
B9.50a |
385 |
195 |
G->A |
atgctataataactaggtgttgaag |
aattcagcttttaccacttctgaa |
Underhill et al. 2001 |
|
M75 |
B9.51 |
355 |
296 |
G->A |
gctaacaggagaaataaattacaga |
tattgaacagaggcatttgtga |
Underhill et al. 2001 |
|
M76 |
G10.100a |
493 |
339 |
T->G |
tagaagtagcagattgggagagg |
cctgataaaatgaaaaaaatggtc |
Underhill et al. 2001 |
|
M77 |
G10.105 |
371 |
129 |
C->T |
cttttcttcccttagctgttcc |
gcaacaatgacaggtcaacc |
Underhill et al. 2001 |
|
M78 |
B9.60a |
301 |
197 |
C->T |
cttcaggcattattttttttggt |
atagtgttccttcacctttcctt |
Underhill et al. 2001 |
|
M81 |
B9.58a |
422 |
147 |
C->T |
acttaatttatagtttcaatccctca |
ttcatggagatgtctgtatctgg |
Underhill et al. 2001 |
|
M82 |
B9.t18 |
328 |
179 |
-2bp |
ctgtactcctgggtagcctgt |
aagaacgattgaacacactaactc |
Underhill et al. 2001 |
|
M83 |
B9. Alu01 |
503 |
120 |
C->T |
gggaaaggagttatccagaaa |
aatgacccatgcttacttagc |
Underhill et al. 2001 |
|
M85 |
B9.67a |
568 |
437 |
C->A |
aacagaattatcaggaaaaggttt |
gcaatatacgtttctgcttcca |
Underhill et al. 2001 |
|
M86 |
B9.t25a |
324 |
85 |
T->G |
tcccattatttgctatatttgct |
tttctcatttaacttttctgaccc |
Underhill et al. 2001 |
|
M87 |
B9.t25b |
324 |
277 |
T->C |
tcccattatttgctatatttgct |
tttctcatttaacttttctgaccc |
Underhill et al. 2001 |
|
M88 |
B9.80 |
314 |
166 |
A->G |
attctagggtcaggcaactagg |
tgtttgttctattctatggtcttcc |
Underhill et al. 2001 |
|
M89 |
B9.94 |
527 |
347 |
C->T |
agaagcagattgatgtcccact |
tccagttaggagatcccctca |
Underhill et al. 2001 |
|
M90 |
B9.96 |
331 |
170 |
C->G |
tgatgtttcttcagtctttgagg |
aagatgaatcctgctaccacc |
Underhill et al. 2001 |
|
M91 |
B9.87a |
495 |
368 |
9T->8 T |
gagcttggactttaggacgg |
aaactttaaggcacttctggc |
Underhill et al. 2001 |
|
M92 |
B9.G2 |
470 |
340 |
T->C |
ttgaatttcccagaattttgc |
ttcagaaactggttttgtgtcc |
Underhill et al. 2001 |
|
M93 |
B9.93 |
504 |
459 |
C->T |
aacaaaacaaaacaaaaatactga |
ggttcacttgaagatagtttaggtta |
Underhill et al. 2001 |
|
M94 |
B9.122 |
405 |
227 |
C->A |
cacatggagaacagagaaatgc |
cttgtgaaatgttgtgaaagtgg |
Underhill et al. 2001 |
|
M95 |
B9.123 |
480 |
172 |
C->T |
gagtggaaatcaagatgccaag |
gggctttctgtaacctggaga |
Underhill et al. 2001 |
|
M96 |
G3.05a |
440 |
70 |
G->C |
gttgccctctcacagagcac |
aaggtcactggaaggattgc |
Underhill et al. 2001 |
|
M97 |
G3.05b |
440 |
355 |
T->G |
gttgccctctcacagagcac |
aaggtcactggaaggattgc |
Underhill et al. 2001 |
|
M98 |
G3.04a |
395 |
158 |
G->C |
gaatggggtgttacatggaga |
cctattatgagagacctgttttcc |
Underhill et al. 2001 |
|
M99 |
G3.04b |
395 |
96-98 |
1 bp deletion |
gaatggggtgttacatggaga |
cctattatgagagacctgttttcc |
Underhill et al. 2001 |
|
M101 |
A8.05a |
460 |
154 |
C->T |
tcacagcagcttcagcaaa |
cctttttggatcatggttctt |
Underhill et al. 2001 |
|
M102 |
B9.101 |
480 |
301 |
G->C |
aaactgggacacttgtaatgaat |
gttttttgagtccttgtttattctt |
Underhill et al. 2001 |
|
M103 |
B9.117new |
463 |
259 |
C->T |
cagtaagtgaactcacacataattcc |
ccagttttatttcagtttcacagc |
Underhill et al. 2001 |
|
M105 |
B9.6-7a |
572 |
478 |
C->T |
gggaggcaacctaagaaag |
aggtgaacgcattctgtcat |
Underhill et al. 2001 |
|
M106 |
B9.6-7b |
572 |
411 |
A->G |
gggaggcaacctaagaaag |
aggtgaacgcattctgtcat |
Underhill et al. 2001 |
|
M107 |
B9.112n |
376 |
298 |
A->G |
caaaagcactcgggttcct |
ctttactcccacttatgcaacg |
Underhill et al. 2001 |
|
M108 |
B9.113n |
321 |
40 |
T->C |
agatggagccagcagaaag |
acacagatgaattgaatgatggt |
Underhill et al. 2001 |
|
M109 |
G3.15 |
312 |
264 |
C->T |
gggtatcaaatgtcttcaacct |
gggaatttcctgctacttgc |
Underhill et al. 2001 |
|
M110 |
B9.86n |
389 |
241 |
T->C |
cagggaaggaccgtaaaagg |
aacctttactgcacatgataaacat |
Underhill et al. 2001 |
|
M111 |
G3.19 |
393 |
188-189 |
2bp (TT) deletion |
aatcttctgcaaagggttcc |
cagctacaaaacaaaatactggac |
Underhill et al. 2001 |
|
M112 |
G3.17a |
445 |
286 |
G->A |
actttttccaacagttatttttga |
tatatttcttgatgatgagaccaat |
Underhill et al. 2001 |
|
M113 |
G3. 17b |
445 |
112 |
A->G |
actttttccaacagttatttttga |
tatatttcttgatgatgagaccaat |
Underhill et al. 2001 |
|
M114 |
G3.23 |
434 |
387 |
T->C |
ttaccacacagttgagtagttctaaa |
caaataaaattggagcggtta |
Underhill et al. 2001 |
|
M115 |
G3.22 |
413 |
201 |
C->T |
agtttacagtcacatcaatttgga |
tcctttttctaccatatctctgttt |
Underhill et al. 2001 |
|
M116.2 |
G3.25a |
429 |
176 |
A->C, triallelic |
aagtatgacttatgaagtacgaagaa |
attcagttagattttacaatgagca |
Underhill et al. 2001 |
|
M117 |
G3.25b |
429 |
142-145 |
4bp deletion |
aagtatgacttatgaagtacgaagaa |
attcagttagattttacaatgagca |
Underhill et al. 2001 |
|
M118 |
G3.29 |
478 |
109 |
A->T |
attctaagtttcacttcctgatcc |
tagttccctaaattacgctacctc |
Underhill et al. 2001 |
|
M119 |
G3.32 |
330 |
224 |
A->C |
gaatgcttatgaatttcccaga |
ttcacacaatatacaagatgtattctt |
Underhill et al. 2001 |
|
M120 |
B9.87b |
495 |
224 |
T->C |
gagcttggactttaggacgg |
aaactttaaggcacttctggc |
Underhill et al. 2001 |
|
M121 |
B9.87c |
495 |
183-187 |
5 bp deletion |
gagcttggactttaggacgg |
aaactttaaggcacttctggc |
Underhill et al. 2001 |
|
M122 |
G3.27a |
393 |
73 |
T->C |
tggtaaactctacttagttgccttt |
cagcgaattagattttcttgc |
Underhill et al. 2001 |
|
M123 |
G3.27b |
393 |
161 |
G->A |
tggtaaactctacttagttgccttt |
cagcgaattagattttcttgc |
Underhill et al. 2001 |
|
M124 |
G3.27c |
393 |
246 |
C->T |
tggtaaactctacttagttgccttt |
cagcgaattagattttcttgc |
Underhill et al. 2001 |
|
M125 |
B9.108a |
367 |
301 |
T->C |
gccaccctcttatgcctct |
tcaggagttatgtgaggaccc |
Underhill et al. 2001 |
|
M126 |
B9.108b |
367 |
277-280 |
4 bp deletion |
gccaccctcttatgcctct |
tcaggagttatgtgaggaccc |
Underhill et al. 2001 |
|
M127 |
G3.30 |
412 |
372 |
C->T |
tgaaaggaaatcagtgtaagagc |
tgtaaaggtgactgtagttcagca |
Underhill et al. 2001 |
|
M128 |
G3. 17c |
445 |
316-317 |
-2bp |
actttttccaacagttatttttga |
tatatttcttgatgatgagaccaat |
Underhill et al. 2001 |
|
M129 |
A8.04 |
255 |
221 |
G->A |
aatggcttactacaaagaacatttc |
tacacggtctctaccaaagaaga |
Underhill et al. 2001 |
|
M131 |
A8.14n |
306 |
93-101 |
9 bp deletion |
cacacccagaatacaataatttt |
ctttttattctacaagtgtacattttc |
Underhill et al. 2001 |
|
M132 |
B9.67b |
568 |
482 |
G->T |
aacagaattatcaggaaaaggttt |
ttttacttgttcgtgtactttcaa |
Underhill et al. 2001 |
|
M133 |
A8.08F-newR |
211 |
116 |
1bp (T) deletion |
tgaaatggaaatcaataaactcagt |
ccttttctttttctttaacccttc |
Underhill et al. 2001 |
|
M134 |
A8.08newF-R |
232 |
54 |
-1bp |
agaatcatcaaacccagaagg |
tctttggcttctctttgaacag |
Underhill et al. 2001 |
|
M135 |
A8.08F-newR |
211 |
150 |
+1bp |
tgaaatggaaatcaataaactcagt |
ccttttctttttctttaacccttc |
Underhill et al. 2001 |
|
M136 |
B9.61 |
339 |
196 |
C->T |
atgtgaagacaacactgtgtgg |
ttgtggtagtcttagttctcatgg |
Underhill et al. 2001 |
|
M137 |
G3.27d |
393 |
289 |
T->C |
tggtaaactctacttagttgccttt |
cagcgaattagattttcttgc |
Underhill et al. 2001 |
|
M138 |
A8.17 |
442 |
291 |
C->T |
aacttccaaaactgtgaaaagatt |
gattaaagcagccccttcag |
Underhill et al. 2001 |
|
M139 |
A8.28a |
459 |
401 |
5G->4G |
ttactgataatgccatattgttttg |
ttctcagacaccaatggtcct |
Underhill et al. 2001 |
|
M141 |
A8.30a |
424 |
51 |
T->A |
catcttaaaatacatttcatagcttt |
gcttactattaggtctagcatcct |
Underhill et al. 2001 |
|
M143 |
B9.50b |
385 |
246 |
G->T |
atgctataataactaggtgttgaag |
aattcagcttttaccacttctgaa |
Underhill et al. 2001 |
|
M144 |
B9.99 |
452 |
342 |
T->C |
agcacaagggtcacattgag |
aggacaaggctttttgttgtt |
Underhill et al. 2001 |
|
M145 |
A8.05b |
208 |
166 |
G->A |
ttcagcaagagtaagcaagagg |
cctttttggatcatggttctt |
Underhill et al. 2001 |
|
M146 |
G3.04d |
395 |
141 |
A->C |
gaatggggtgttacatggaga |
cctattatgagagacctgttttcc |
Underhill et al. 2001 |
|
M147 |
G3.35 |
439 |
116 |
1 bp insertion (extra T) |
gtattctggggcaattttagg |
ttgatacaagaggttattttaagca |
Underhill et al. 2001 |
|
M148 |
B9.67c |
568 |
314 |
A->G |
aacagaattatcaggaaaaggttt |
ttttacttgttcgtgtactttcaa |
Underhill et al. 2001 |
|
M149 |
B9.67d |
568 |
469 |
G->A |
aacagaattatcaggaaaaggttt |
ttttacttgttcgtgtactttcaa |
Underhill et al. 2001 |
|
M150 |
B9.18 |
289 |
146 |
C->T |
gcagtggagatgaagtgagac |
cctactttccccctcttctg |
Underhill et al. 2001 |
|
M151 |
B9.58b |
422 |
209 |
G->A |
acttaatttatagtttcaatccctca |
ttcatggagatgtctgtatctgg |
Underhill et al. 2001 |
|
M152 |
B9.13 |
287 |
101 |
C->T |
aagctattttggtttcctttca |
gccttgtgtgggtatgattg |
Underhill et al. 2001 |
|
M153 |
A8.28c |
459 |
427 |
T->A |
ttactgataatgccatattgttttg |
ttctcagacaccaatggtcct |
Underhill et al. 2001 |
|
M154 |
B9.58c |
422 |
252 |
T->C |
acttaatttatagtttcaatccctca |
ttcatggagatgtctgtatctgg |
Underhill et al. 2001 |
|
M155 |
G10.57c |
327 |
251 |
G->A |
tctctaacttctgtgagccac |
ggaaaaactaaactctaaatctct |
Underhill et al. 2001 |
|
M156 |
A8.05c |
208 |
147 |
A->G |
ttcagcaagagtaagcaagagg |
cctttttggatcatggttctt |
Underhill et al. 2001 |
|
M157 |
B9.12b |
352 |
176 |
A->C |
gctggcaagacacttctga |
aatatgttcctgacaccttcc |
Underhill et al. 2001 |
|
M158 |
A8.08F-newR |
211 |
77 |
G->A |
tgaaatggaaatcaataaactcagt |
ccttttctttttctttaacccttc |
Underhill et al. 2001 |
|
M159 |
G10. 83new b |
190 |
89 |
A->C |
attggattgatttcagccttc |
attttattttctgtgttccttgc |
Underhill et al. 2001 |
|
M160 |
B9.47b |
361 |
251 |
A->C |
cagaataataggagaatttttggt |
attttccttattttctaagcagc |
Underhill et al. 2001 |
|
M161 |
A8.05d |
460 |
111 |
C->A |
tcacagcagcttcagcaaa |
cctttttggatcatggttctt |
Underhill et al. 2001 |
|
M163 |
G10.35b |
340 |
168 |
A->C |
gcagcatataaaactttcagg |
aaaacctaactttgctcaagc |
Underhill et al. 2001 |
|
M164 |
G10.100b |
493 |
329 |
T->C |
tagaagtagcagattgggagagg |
cctgataaaatgaaaaaaatggtc |
Underhill et al. 2001 |
|
M165 |
B9.008c |
340 |
132 |
A->G |
aaagcgagagattcaatccag |
ttttagcaagttaagtcaccagc |
Underhill et al. 2001 |
|
M166 |
G3.27e |
393 |
53 |
G->A |
tggtaaactctacttagttgccttt |
cagcgaattagattttcttgc |
Underhill et al. 2001 |
|
M168 |
DFFRY Ex01B site a |
473 |
371 |
C->T |
agtttgaggtagaatactgtttgct |
aatctcataggtctctgactgttc |
Underhill et al. 2001 |
|
M169 |
DFFRY Ex01B siteb |
473 |
97 |
T->C |
agtttgaggtagaatactgtttgct |
ccagggccccgagggactctt |
Underhill et al. 2001 |
|
M170 |
DFFRY Exon08 |
405 |
327 |
A->C |
tgcttcacacaaatgcgttt |
ccaattactttcaacatttaagacc |
Underhill et al. 2001 |
|
M171 |
DFFRY Ex01B sitec |
473 |
440 |
G->C |
agtttgaggtagaatactgtttgct |
ccagggccccgagggactctt |
Underhill et al. 2001 |
|
M172 |
DFFRY Ex45 |
345 |
197 |
T->G |
ttgaagttacttttataatctaatgctt |
ataatttattactttacagtcacagtgg |
Underhill et al. 2001 |
|
M173 |
DBY Ex08 |
417 |
191 |
A->C |
aagaaatgttgaactgaaagttgat |
aggtgtatctggcatccgtta |
Underhill et al. 2001 |
|
M174 |
DffryEx38 |
348 |
219 |
T->C |
acatctcagatcgttgtttggt |
aaaaagccatgcaattacctg |
Underhill et al. 2001 |
|
M175 |
UTY1 exon 07 |
444 |
84-88 |
-5bp |
ttgagcaagaaaaatagtaccca |
ctccattcttaactatctcaggga |
Underhill et al. 2001 |
|
M178 |
G10.72b |
514 |
220 |
T->C |
taagcctaaagagcagtcagag |
cagagggagcaatgaggaca |
Underhill et al. 2001 |
|
M179 |
Dffry exon 07 |
426 |
316 |
C->T |
attatgcagaattaagatgaccag |
agacaggttcacatcactaatgg |
Underhill et al. 2001 |
|
M180 |
Dffry exon 11 |
447 |
402 |
T->C |
acactactgtgctgtaatttgtgaa |
tggtaagatttctctacatgaacag |
Underhill et al. 2001 |
|
M181 |
Dffry exon 12 |
294 |
130 |
T->C |
gcttttatttattctacttttgttttt |
aacaatgaccaattctttttcat |
Underhill et al. 2001 |
|
M182 |
Dffry exon 13 |
364 |
38 |
C->T |
tattcaaagacttaaagcagtggtta |
ggaatcatcttgtaactaagttatcct |
Underhill et al. 2001 |
|
M183 |
Dffry exon 19 |
427 |
324 |
A->C |
actgggtaaatatgactatgattgag |
ttccttttaacctattattactttcc |
Underhill et al. 2001 |
|
M184 |
Dffry exon 23 |
305 |
62 |
G->A |
cactttattttagtctgtgtctttttc |
aaacttagtaacatctatttctcctct |
Underhill et al. 2001 |
|
M185 |
Dffry exon 27 |
430 |
89 |
C->T |
ggagtacctatcactgaatgtgc |
gtcattcatttctgcttggaac |
Underhill et al. 2001 |
|
M186 |
Dffry exon 30 |
365 |
62 |
1 bp deletion |
ttgcatttactgttctagagagttct |
gtacttactttaatgagattagcac |
Underhill et al. 2001 |
|
M188 |
Dffry exon 31 |
401 |
185 |
C->T |
gtattccctttgaagaaacatattg |
aagtccatcacaagttaattttttc |
Underhill et al. 2001 |
|
M189 |
Dffry exon 34 |
378 |
191 |
G->T |
actctcagcttatgtttgtcattg |
gcttttggtacactctgctttt |
Underhill et al. 2001 |
|
M190 |
Dffry exon 44 |
346 |
73 |
A->G |
ctctgtcacaagtaaggaaatgat |
ctgtccattggtagccttttt |
Underhill et al. 2001 |
|
M191 |
DBY exon 2 |
429 |
342 |
T->G |
ttgcatttgtcatggttggt |
gccaggataattttttgtattttc |
Underhill et al. 2001 |
|
M192 |
DBY STS 02 |
457 |
202 |
C->T |
catgggctgctgacatttt |
aaatccttttggtttgtttgttt |
Underhill et al. 2001 |
|
M193 |
DBY STS 03a |
426 |
56 |
4 bp insertion |
gcctggatgaggaagtgag |
gccttctccatttttgacct |
Underhill et al. 2001 |
|
M194 |
DBY STS 03b |
426 |
101 |
T->C |
gcctggatgaggaagtgag |
gccttctccatttttgacct |
Underhill et al. 2001 |
|
M195 |
DBY STS 06 |
515 |
430 |
A->G |
ccactcagctttcctcaggt |
cgttcgtttagtcataagatcg |
Underhill et al. 2001 |
|
M196 |
DBY STS 07 |
445 |
330 |
C->G |
ttagacaacttactactttgatgtcct |
taaacattacatgagaaattgctgt |
Underhill et al. 2001 |
|
M197 |
DBY exon 07 |
408 |
105 |
T->C |
tcagacagtttagttggttacttcc |
aagacacatcctcagctaatcttt |
Underhill et al. 2001 |
|
M198 |
DBY STS 08 |
444 |
45 |
C->T |
tgaggtggaatgtatcagtatacc |
tgatttcaaggatttgttagtctt |
Underhill et al. 2001 |
|
M199 |
DBY STS 08 |
444 |
404 |
1 bp insertion (extra G) |
tgaggtggaatgtatcagtatacc |
tgatttcaaggatttgttagtctt |
Underhill et al. 2001 |
|
M200 |
DBY STS 09 |
429 |
318 |
G->A |
ggcttacacttgcagactttg |
ggagaaatgtacaagagtctaaacc |
Underhill et al. 2001 |
|
M201 |
DBY exon 11&12 |
326 |
136 |
G->T |
tatgcatttgttgagtatatgtc |
gttctgaatgaaagttcaaacg |
Underhill et al. 2001 |
|
M202 |
DBY exon 16 |
392 |
259 |
T->G |
ggaattgcagggtttaagc |
gccacccacctgtaatcc |
Underhill et al. 2001 |
|
M203 |
UTY1 exon01 |
503 |
248 |
G->C |
gagtgccaagctgaggatga |
2 sequnces for this primer |
Underhill et al. 2001 |
|
M204 |
UTY1 ex 02 = Intron 1 |
286 |
234 |
T->G |
aaggggcgaagtattccag |
tgaagaggagtctgttagcctg |
Underhill et al. 2001 |
|
M205 |
UTY Intron 2a |
541 |
78 |
T->A |
gtataatactgtggttggaaagca |
ccaaactatgtgataataaatggg |
Underhill et al. 2001 |
|
M206 |
UTY Intron 2b |
541 |
31 |
T->G |
gtataatactgtggttggaaagca |
ccaaactatgtgataataaatggg |
Underhill et al. 2001 |
|
M207 |
UTY1 ex03 = Intron 3a |
423 |
79 |
A->G |
aggaaaaatcagaagtatccctg |
caaaattcaccaagaatccttg |
Underhill et al. 2001 |
|
M208 |
UTY1 = Intron 3b |
507 |
352 |
C->T |
ataaatacaaaatcacctgatggat |
ttaaacagcgaaattactaacaaaa |
Underhill et al. 2001 |
|
M209 |
UTY1 = Intron 3c |
550 |
471 |
A->G |
cactgtcttccacaatggttg |
aggtgattttgtatttatcttccc |
Underhill et al. 2001 |
|
M210 |
UTY1 = Intron 3d |
550 |
461 |
A->T |
cactgtcttccacaatggttg |
aggtgattttgtatttatcttccc |
Underhill et al. 2001 |
|
M211 |
UTY1 = Intron 4a |
538 |
381 |
C->T |
caattcactatttgaggaatcca |
gaagtctctgatttatttggcag |
Underhill et al. 2001 |
|
M212 |
UTY1 ex05a |
409 |
234 |
C->A |
tataatcaagttaccaattactggc |
ttttgtaacattgaatggcaaa |
Underhill et al. 2001 |
|
M213 |
UTY1 ex05b=Intron 4c |
409 |
290 |
T->C |
tataatcaagttaccaattactggc |
ttttgtaacattgaatggcaaa |
Underhill et al. 2001 |
|
M214 |
UTY1 ex12 = Intron 11 |
460 |
404 |
T->C |
tattacaaaatatggaaacaaggc |
gaaatgccacttcactccag |
Underhill et al. 2001 |
|
M215 |
UTY1 exon 14 |
386 |
163 |
A->G |
gtaaaactcagatatatacatcccatg |
aaaaaaaaagaatcactatcttaacg |
Underhill et al. 2001 |
|
M216 |
UTY1 intron 18 |
557 |
54 |
C->T |
ctcaaccagtttttatgaagctag |
gagagtctgaactaatgtgtcttgt |
Underhill et al. 2001 |
|
M217 |
UTY1 intron 17 |
461 |
219 |
A->C |
gcttatttttagtctctcttccat |
acctgttgaatgttacatttcttt |
Underhill et al. 2001 |
|
M218 |
UTY1 intron 16 |
482 |
380 |
C->T |
ttgtgagtttttttccatcaatc |
tttattgacgatggtattagaagag |
Underhill et al. 2001 |
|
M219 |
UTY1 intron 16 |
482 |
232 |
T->C |
ttgtgagtttttttccatcaatc |
tttattgacgatggtattagaagag |
Underhill et al. 2001 |
|
M220 |
UTY1 intron 16 |
482 |
367 |
A->G |
ttgtgagtttttttccatcaatc |
tttattgacgatggtattagaagag |
Underhill et al. 2001 |
|
M221 |
UTY1 intron 18 |
324 |
200 |
G->A |
gggaaatgtgaaaggaaaata |
ttaaacttttataacactgacagaaac |
Underhill et al. 2001 |
|
M223 |
A8.05e |
208 |
67 |
C->T |
ttcagcaagagtaagcaagagg |
cctttttggatcatggttctt |
Underhill et al. 2001 |
|
M224 |
B9.60b |
301 |
193 |
T->C |
cttcaggcattattttttttggt |
atagtgttccttcacctttcctt |
Underhill et al. 2001 |
|
YAP |
DYS287 |
599(Alu+) |
Alu- ->Alu+ |
caggggaagataaagaaata |
aagccactattagacaacct |
Hammer and Horai 1995 |
|
|
P1 |
DYS287 |
858 |
230 |
C->T |
aggagaagtgggagtaaga |
actgctaaaaggggatggat |
Hammer et al. 1998 |
|
P2 |
DYS287 |
536 |
153 |
C->T |
gatgcaaatgagaaagaact |
ctaaaaactggagggagaaa |
Hammer et al. 1998 |
|
P3 |
DYS287 |
536 |
397 |
G->A |
gatgcaaatgagaaagaact |
ctaaaaactggagggagaaa |
Hammer et al. 1998 |
|
P4 |
DYS7 |
160 |
108 |
C->T |
tggtctcaggaagtttttgc |
gagagtcataatgccgacgt |
Hammer et al. 2001 |
|
P5 |
DYS389 |
624 |
36 |
C->T |
aacccctgccacaaatacat |
tctggaacccctggagagatc |
present paper |
|
P6 |
DYS265 |
122 |
83 |
G->C |
ctgaaggtggccatttctta |
ccatctggctcaatggttag |
Hammer et al. 2001 |
|
P7 |
DYS194 |
327 |
60 |
T->C |
atgcctacaaaatgacac |
ccaacaatatgtcacaatctc |
Hammer et al. 2001 |
|
P8 |
DYS190 |
661 |
461 |
G->A |
agggagatgagaagacac |
cgtggcatcttgtcatgtct |
Hammer et al. 2001 |
|
P9 |
486 Ya5 |
475 |
319 |
C->A |
tgtggtaagtgtagtttcaa |
tctggactggaaacataa |
Hammer et al. 2001 |
|
P14 |
DYS188 |
741 |
361 |
C->T |
tttcagagtttctctact |
tttttttttaatatgaggg |
Hammer et al. 2000 |
|
P15 |
DYS221 |
191 |
138 |
C->T |
agagagttttctaacagggcg |
tgggaatcacttttgcaact |
Hammer et al. 2000 |
|
P16 |
DYS211 |
169 |
105 |
A->T |
aggctccatctgtagcacac |
taaccttatagaccaaccccg |
Hammer et al. 2000 |
|
P18 |
DYS194 |
697 |
208 |
C->T |
tggatctgattcacaggtag |
ccaacaatatgtcacaatctc |
present paper |
|
P19 |
DYS190 |
661 |
478 |
T->G |
agggagatgagaagacac |
cgtggcatcttgtcatgtct |
Hammer et al. 2001 |
|
P20 |
DYS194 |
697 |
158 |
C deletion |
tggatctgattcacaggtag |
ccaacaatatgtcacaatctc |
present paper |
|
P21 |
DYS194 |
819 |
759 |
C->A |
tagccctttgtcttgattacag |
gtgctaggtccaaatatg |
present paper |
|
P22 |
DYS257 |
369 |
169 |
G/A->A |
gcttcaggaacttgtcgg |
aggacccaattattgcacac |
Hammer et al. 2001 |
|
P25 |
DYS194 |
327 |
79 |
C->A |
atgcctacaaaatgacac |
ccaacaatatgtcacaatctc |
Hammer et al. 2000 |
|
P27 |
DYS257 |
369 |
115 |
G->A |
gcttcaggaacttgtcgg |
aggacccaattattgcacac |
Hammer et al. 2001 |
|
P28 |
16E4 Ya5 |
519 |
410 |
C->T |
gaagcaatactctgaaaagt |
tttggagggacattattctc |
Hammer et al. 2001 |
|
P29 |
ARSDP |
684 |
534 |
A->C |
ggtgggctgtttgaaaaaga |
agccaaataccagtcgtcac |
present paper |
|
P31 |
ARSDP |
703 |
126 |
T->C |
taaggctgcgtgttccctat |
gcactgtcactgtggatgtt |
Hammer et al. 2001 |
|
P33 |
DYS194 |
819 |
718 |
T->C |
tagccctttgtcttgattacag |
gtgctaggtccaaatatg |
Hammer et al. 2001 |
|
P36 |
ARSDP |
637 |
217 |
G->A |
tgaaggacagtaagtacaca |
taagtccattgatctacaga |
present paper |
|
P37 |
ARSDP |
447 |
135 |
T->C |
cgtctatggccttgaaga |
tccgaaaatgcagacttt |
Karafet et al. 2001 |
|
P44 |
ARSDP |
703 |
134 |
G->A |
taaggctgcgtgttccctat |
gcactgtcactgtggatgtt |
present paper |
|
SRY4064 |
SRY |
612 |
258 |
G->A |
gcattttgttacccttctcaac |
tggcaagacttacgagatttc |
Hammer et al. 1998 |
|
SRY9138 |
SRY |
1,067 |
363 |
C->T |
tttaacattgacaggaccag |
gacaaccaagaagaggaacc |
Hammer et al. 1998 |
|
SRY10831a |
SRY |
536 |
135 |
A->G |
ccacaacctctttcatc |
aataaaaatcccgtaaaata |
Hammer et al. 1998 |
|
SRY10831b |
SRY |
536 |
135 |
G->A |
ccacaacctctttcatc |
aataaaaatcccgtaaaata |
Hammer et al. 1998 |
|
92R7 |
92R7 |
722 |
504 |
G->A |
gacccgctgtagacctgact |
gcctatctacttcagtgatttct |
Hurles et al. 1999 |
|
Tat |
RBF5 |
112 |
28 |
T->C |
gactctgagtgtagacttgtga |
gaaggtgccgtaaaagtgtgaa |
Zerjal et al. 1997 |
|
Apt |
50f2/E |
850 |
419 |
G->A |
tggattgcattcaacttcacttac |
ctgagttcaaatgctcgggtctc |
Pandya et al. 1998 |
|
LINE1 |
DYZ3 |
~140 (LINE+) |
LINE- -> LINE+ |
gcacaatgtgcacatgtacccta |
tgatgtgtgcattcatctcatatat |
Santos et al. 2000 |
|
|
MSY2 |
DYS440 |
499/400 |
4->3 |
ctggctttggggacgtagta |
ctgcgctttatgagcatacg |
Bao et al. 2000 |
|
|
SRY-2627 |
SRY |
1242 |
299 |
C->T |
aggtcttttttgccttctta |
atgcacggtttcttttga |
Veitia et al. 1997 |
|
SRY+465 |
SRY |
148 |
52 |
C->T |
gccgaagaattgcagtttgc |
gttgatgggcggtaagtggc |
Shinka et al. 1999 |
|
47z |
DXYS5Y |
381 |
291 |
G->C |
tgagtcaatgtcaatgaatc |
tagttacgccttg(g)cataac |
Shinka et al. 1999 |
|
MEH1 |
50f2/E |
687 |
330 |
C->G |
gtgcatctattgactctttcatgg |
caccaccatgtcccacagatttg |
present paper |
|
MEH2 |
PCDHY intron 4 |
938 |
880 |
G->T |
attcataatatttgattcagaacag |
taccatgaaaattcataatccaca |
present paper |
|
50f2(P) |
50f2/E |
687 |
547 |
G->C |
caccaccatgtcccacagatttg |
gtgcatctattgactctttcatgg |
present paper |
|
12f2 |
DYS11 |
88 |
present->absent |
ctgactgatcaaaatgcttacagatc |
ggatcccttccttacaccttatac |
Rosser et al. 2000 |
|