The University of Arizona

   v2002.02.07

Supplementary Data - A table listing of all published markers and primer information included in this survey.

Mutation Name

Region/STS

Size (bp)

Site

mutation

Forward Primer

Reverse Primer

reference

M2

DYS271

209

168

A->G

aggcactggtcagaatgaag

aatggaaaatacagctcccc

Seielstad et al. 1994

M3

DYS199

241

181

C->T

taatcagtctcctcccagca

aaaattgtgaatctgaaatttaagg

Underhill et al. 1996

M4

DYS234

273

88

A->G

tcctaggttatgattacagagcg

acgtcttgtaaacatgacaagg

Underhill et al. 1997

M5

DYS214a

322

73

C->T

gggtttatactgacctgccaatgtt

ttattgggaactttcagggg

Underhill et al. 1997

M6

DYS198

218

37

T->C

cactaccacatttctggttgg

cgctgagtccattctttgag

Underhill et al. 1997

M7

DYS253

300

236

C->G

actgtgagcgagctgaaaat

gcagccttgtgaaccaatta

Underhill et al. 1997

M8

DYS263

267

137

G->T

cccacccacttcagtatgaa

aggctgacagacaagtccac

Underhill et al. 1997

M9

G10.35a

340

68

C->G

gcagcatataaaactttcagg

gcttgagcaaagttaggtttt

Underhill et al. 1997

M10

G10.10

343

156

T->C

gcattgctataagttacctgc

taataaaaattgggtcaccc

Underhill et al. 1997

M11

G10.37

222

44

A->G

tctctctgtctgtctctccctcc

gagcataaacaagaacttactgagc

Underhill et al. 1997

M12

DYS260a

309

286

G->T

actaaaacaccattagaaacaaagg

ctgagcaacatagtgacccc

Underhill et al. 1997

M13

G10.06

233

157

G->C

tcctaacctggtggtctttc

tgagccatgattttatccaac

Underhill et al. 1997

M14

G10.07

287

180

T->C

agacggttagatcagttctctg

tagataaaagcacattgacacc

Underhill et al. 1997

M15

G10.16

295

304

9 bp insertion

acaaatcctgaacaatcgc

tgcatgtggttaaaatttcc

Underhill et al. 1997

M16

DYS214b

266

38

C->A

tgttatgtcatttgaacccag

ccgtgtgttgctgggctgt

Underhill et al. 1997

M17

G10.47a

333

68

4G->3G

ctggtcataacactggaaatc

tgaacctacaaatgtgaaact

Underhill et al. 1997

M18

G10.47b

333

62

2 bp insertion

ctggtcataacactggaaatc

tgaacctacaaatgtgaaactc

Underhill et al. 1997

M19

G10.47c

333

131

T->A

ctggtcataacactggaaatc

tgaacctacaaatgtgaaactc

Underhill et al. 1997

M20

G10.48

413

118

A->G

gattgggtgtcttcagtgct

cacacaacaaggcaccat

Underhill et al. 1997

M21

G10.43

415

357

A->T

cttttatttctgactacaggg

aacagcagatttgagcagg

Underhill et al. 1997

M22

DYS273

327

129

A->G

agaagggtctgaaagcaggt

gcctactacctggaggctt

Underhill et al. 1997

M23

G10.57a

327

159

A->G

tctctaacttctgtgagccac

ggaaaaactaaactctaaatctct

Underhill et al. 2001

M25

B9.008b

340

121

G->C

aaagcgagagattcaatccag

ttttagcaagttaagtcaccagc

Underhill et al. 2001

M26

B9.005

321

68

G->A

ccagtggtaaagttttattacaattt

ttcacagtaagcaggcaatcc

Underhill et al. 2001

M27

G10.65

526

398

C->G

cggaagtcaaagttatagttactgg

cactgctgttctgtctaccaca

Underhill et al. 2001

M28

G10.33n

332

277

T->G

gcttacttgggacacaggct

agagaagttgtcatacgataatgg

Underhill et al. 2001

M30

G10.66a

486

132

G->A

gaaccagacaatacgaaatagaag

tttagcggcttatctcattacc

Underhill et al. 2001

M31

G10.66b

486

71

G->C

gaaccagacaatacgaaatagaag

tttagcggcttatctcattacc

Underhill et al. 2001

M32

G10.68a

370

166

T->C

ttgaaaaaatacagtggaac

caagtgtttaaggatacaga

Underhill et al. 2001

M33

G10.68b

370

180

A->C

ttgaaaaaatacagtggaac

caagtgtttaaggatacaga

Underhill et al. 2001

M34

G10.69

372

131

G->T

cacttcacatttgtttttagg

 agtcattatttagtcattccag

Underhill et al. 2001

M35

G10.72a

513

168

G->C

taagcctaaagagcagtcagag

agagggagcaatgaggaca

Underhill et al. 2001

M36

G10.82a

436

74

T->G

agatcatcccaaaacaatcataa

aaggctgaaatcaatccaatctg

Underhill et al. 2001

M37

G10.STS 84

422

203

C->T

cagattggattgatttcagcctt

agcatacaaaaaaaaaaaactgc

Underhill et al. 2001

M38

G10.73a

337

146

T->G

cagtttttagagaataatgtcct

ttaaagaaaagaaaagcagatg

Underhill et al. 2001

M39

G10.73a

337

236

C deletion

cagtttttagagaataatgtcct

ttaaagaaaagaaaagcagatg

Underhill et al. 2001

M42

B9.008a

340

297

A->T

aaagcgagagattcaatccag

ttttagcaagttaagtcaccagc

Underhill et al. 2001

M43

DYS260b

309

77

A->G

actaaaacaccattagaaacaaagg

ctgagcaacatagtgacccc

Underhill et al. 2001

M44

G10.87

389

263

G->C

ctggcaccttctgatattttgag

tgtgatttctatgtgtttgaggac

Underhill et al. 2001

M45

B9.12

352

109

G->A

gctggcaagacacttctgag

aatatgttcctgacaccttcc

Underhill et al. 2001

M47

G10.82b

436

395

G->A

agatcatcccaaaacaatcataa

aaggctgaaatcaatccaatctg

Underhill et al. 2001

M48

G10.79n

240

160

A->G

aaacaatatgtatgctaattttgct

tcaatgtaaatgttagtataaggatg

Underhill et al. 2001

M49

B9.15new a

354

229

T->C

cggcaacagtgaggacagt

 tgcttcaggagatagaggctc

Underhill et al. 2001

M50

B9.15new b

354

175

T->C

cggcaacagtgaggacagt

tgcttcaggagatagaggctc

Underhill et al. 2001

M51

B9.16

339

33

G->A

gagcctctatctcctgaagc

tgactgctctgttgcgaca

Underhill et al. 2001

M52

G10.88

534

477

A->C

actgtagcatggtcatctagggtg

gacgaagcaaacatttcaagagag

Underhill et al. 2001

M54

B9.17

360

164

G->A

cctcctctggtctgggttt

tgtgtcaggactggttccat

Underhill et al. 2001

M55

B9.28

382

228

T->C

cgtaggcgtttgacagcag

cctttcttcgtaatcctccc

Underhill et al. 2001

M56

B9.29

399

39

A->T

ccagaaactgaagtacaaatgc

tctcattgctgcctctcttt

Underhill et al. 2001

M57

G10.85n

326

133

 +1bp

attgggaggaagtggtttctg

 gttctgtatcttttccattatttgc

Underhill et al. 2001

M58

G10.57b

327

224

G->A

tctctaacttctgtgagccac

ggaaaaactaaactctaaatctct

Underhill et al. 2001

M59

B9.15new c

354

179

A->C

cggcaacagtgaggacagt

tgcttcaggagatagaggctc

Underhill et al. 2001

M60

B9.34

388

242

 +1bp

gcactggcgttcatcatct

atgttcattatggttcaggagg

Underhill et al. 2001

M61

G10.83new a

190

98

C->T

attggattgatttcagccttc

attttattttctgtgttccttgc

Underhill et al. 2001

M62

DYS260c

309

60

T->C

actaaaacaccattagaaacaaagg

ctgagcaacatagtgacccc

Underhill et al. 2001

M63

B9.22

308

43

G->A

ctcttcccttggttcctattc

ttaggcagaagcatccacc

Underhill et al. 2001

M64

B9.t23

325

279

A->G recurrent

tatagaccctgactactcaagagaa

ggtagccctttccagtctgt

Underhill et al. 2001

M65

B9.t26

436

152

A->T

ttctgatgccagcttgttcg

gctacgggattaaagtaaccttg

Underhill et al. 2001

M66

B9.41

415

135

A->C

ctgtgtaacaccatcaagtgc

acatcttctggagacatacttcc

Underhill et al. 2001

M67

B9.36new a

409

377

A->T

ccatattctttatactttctacctgc

 gtcttttcacttgttcgtggac

Underhill et al. 2001

M68

B9.36new b

409

268

A->G

ccatattctttatactttctacctgc

gtcttttcacttgttcgtggac

Underhill et al. 2001

M69

B9.62a

257

222

T->C

ggttatcatagcccactatactttg

atctttattccctttgtcttgct

Underhill et al. 2001

M70

B9.62b

257

45

A->C

ggttatcatagcccactatactttg

atctttattccctttgtcttgct

Underhill et al. 2001

M71

B9.6 3b

328

197

C->T

ttgaattatagtcccttgcctc

gcttcttttctgtgatggctg

Underhill et al. 2001

M72

B9.6 3a

328

157

A->G

ttgaattatagtcccttgcctc

gcttcttttctgtgatggctg

Underhill et al. 2001

M73

B9.47a

361

260

2bp deletion

cagaataataggagaatttttggt

attttccttattttctaagcagc

Underhill et al. 2001

M74

B9.50a

385

195

G->A

atgctataataactaggtgttgaag

 aattcagcttttaccacttctgaa

Underhill et al. 2001

M75

B9.51

355

296

G->A

gctaacaggagaaataaattacagac

 tattgaacagaggcatttgtga

Underhill et al. 2001

M76

 G10.100a

493

339

T->G

tagaagtagcagattgggagagg

cctgataaaatgaaaaaaatggtc

Underhill et al. 2001

M77

G10.105

371

129

C->T

cttttcttcccttagctgttcc

gcaacaatgacaggtcaacc

Underhill et al. 2001

M78

 B9.60a

301

197

C->T

cttcaggcattattttttttggt

atagtgttccttcacctttcctt

Underhill et al. 2001

M81

B9.58a

422

147

C->T

acttaatttatagtttcaatccctca

 ttcatggagatgtctgtatctgg

Underhill et al. 2001

M82

 B9.t18

328

179

 -2bp

ctgtactcctgggtagcctgt

aagaacgattgaacacactaactc

Underhill et al. 2001

M83

B9. Alu01

503

120

C->T

gggaaaggagttatccagaaa

aatgacccatgcttacttagc

Underhill et al. 2001

M85

B9.67a

568

437

C->A

aacagaattatcaggaaaaggttt

gcaatatacgtttctgcttcca

Underhill et al. 2001

M86

B9.t25a

324

85

T->G

tcccattatttgctatatttgct

tttctcatttaacttttctgaccc

Underhill et al. 2001

M87

B9.t25b

324

277

T->C

tcccattatttgctatatttgct

tttctcatttaacttttctgaccc

Underhill et al. 2001

M88

B9.80

314

166

A->G

attctagggtcaggcaactagg

tgtttgttctattctatggtcttcc

Underhill et al. 2001

M89

B9.94

527

347

C->T

agaagcagattgatgtcccact

tccagttaggagatcccctca

Underhill et al. 2001

M90

B9.96

331

170

C->G

tgatgtttcttcagtctttgagg

aagatgaatcctgctaccacc

Underhill et al. 2001

M91

B9.87a

495

368

9T->8 T

gagcttggactttaggacgg

aaactttaaggcacttctggc

Underhill et al. 2001

M92

B9.G2

470

340

T->C

ttgaatttcccagaattttgc

ttcagaaactggttttgtgtcc

Underhill et al. 2001

M93

B9.93

504

459

C->T

aacaaaacaaaacaaaaatactgaa

ggttcacttgaagatagtttaggtta

Underhill et al. 2001

M94

 B9.122

405

227

C->A

cacatggagaacagagaaatgc

cttgtgaaatgttgtgaaagtgg

Underhill et al. 2001

M95

B9.123

480

172

C->T

gagtggaaatcaagatgccaag

gggctttctgtaacctggaga

Underhill et al. 2001

M96

G3.05a

440

70

G->C

gttgccctctcacagagcac

aaggtcactggaaggattgc

Underhill et al. 2001

M97

G3.05b

440

355

T->G

gttgccctctcacagagcac

aaggtcactggaaggattgc

Underhill et al. 2001

M98

 G3.04a

395

158

G->C

gaatggggtgttacatggaga

 cctattatgagagacctgttttcc

Underhill et al. 2001

M99

G3.04b

395

96-98

1 bp deletion

gaatggggtgttacatggaga

cctattatgagagacctgttttcc

Underhill et al. 2001

M101

A8.05a

460

154

C->T

tcacagcagcttcagcaaa

cctttttggatcatggttctt

Underhill et al. 2001

M102

B9.101

480

301

G->C

aaactgggacacttgtaatgaat

 gttttttgagtccttgtttattctt

Underhill et al. 2001

M103

B9.117new

463

259

C->T

cagtaagtgaactcacacataattcc

ccagttttatttcagtttcacagc

Underhill et al. 2001

M105

B9.6-7a

572

478

C->T

gggaggcaacctaagaaag

 aggtgaacgcattctgtcat

Underhill et al. 2001

M106

B9.6-7b

572

411

A->G

gggaggcaacctaagaaag

 aggtgaacgcattctgtcat

Underhill et al. 2001

M107

B9.112n

376

298

A->G

caaaagcactcgggttcct

ctttactcccacttatgcaacg

Underhill et al. 2001

M108

B9.113n

321

40

T->C

agatggagccagcagaaag

acacagatgaattgaatgatggt

Underhill et al. 2001

M109

G3.15

312

264

C->T

gggtatcaaatgtcttcaacct

gggaatttcctgctacttgc

Underhill et al. 2001

M110

B9.86n

389

241

T->C

cagggaaggaccgtaaaagg

aacctttactgcacatgataaacat

Underhill et al. 2001

M111

 G3.19

393

188-189

2bp (TT) deletion

aatcttctgcaaagggttcc

 cagctacaaaacaaaatactggac

Underhill et al. 2001

M112

 G3.17a

445

286

G->A

actttttccaacagttatttttga

tatatttcttgatgatgagaccaat

Underhill et al. 2001

M113

G3. 17b

445

112

A->G

actttttccaacagttatttttga

tatatttcttgatgatgagaccaat

Underhill et al. 2001

M114

 G3.23

434

387

T->C

ttaccacacagttgagtagttctaaa

caaataaaattggagcggtta

Underhill et al. 2001

M115

 G3.22   

413

201

C->T

agtttacagtcacatcaatttgga

tcctttttctaccatatctctgttt

Underhill et al. 2001

M116.2

G3.25a

429

176

A->C, triallelic

aagtatgacttatgaagtacgaagaaa

attcagttagattttacaatgagca

Underhill et al. 2001

M117

G3.25b

429

142-145

4bp deletion

aagtatgacttatgaagtacgaagaaa

 attcagttagattttacaatgagca

Underhill et al. 2001

M118

G3.29

478

109

A->T

attctaagtttcacttcctgatcc

tagttccctaaattacgctacctc

Underhill et al. 2001

M119

G3.32

330

224

A->C

gaatgcttatgaatttcccaga

ttcacacaatatacaagatgtattctt

Underhill et al. 2001

M120

B9.87b

495

224

T->C

gagcttggactttaggacgg

aaactttaaggcacttctggc

Underhill et al. 2001

M121

B9.87c

495

183-187

5 bp deletion

gagcttggactttaggacgg

 aaactttaaggcacttctggc

Underhill et al. 2001

M122

G3.27a

393

73

T->C

tggtaaactctacttagttgccttt

cagcgaattagattttcttgc

Underhill et al. 2001

M123

G3.27b

393

161

G->A

tggtaaactctacttagttgccttt

cagcgaattagattttcttgc

Underhill et al. 2001

M124

G3.27c

393

246

C->T

tggtaaactctacttagttgccttt

cagcgaattagattttcttgc

Underhill et al. 2001

M125

B9.108a

367

301

T->C

gccaccctcttatgcctct

tcaggagttatgtgaggaccc

Underhill et al. 2001

M126

B9.108b

367

277-280

4 bp deletion

gccaccctcttatgcctct

tcaggagttatgtgaggaccc

Underhill et al. 2001

M127

G3.30

412

372

C->T

tgaaaggaaatcagtgtaagagc

 tgtaaaggtgactgtagttcagca

Underhill et al. 2001

M128

G3. 17c

445

316-317

 -2bp

actttttccaacagttatttttga

tatatttcttgatgatgagaccaat

Underhill et al. 2001

M129

 A8.04

255

221

G->A

aatggcttactacaaagaacatttc

tacacggtctctaccaaagaaga

Underhill et al. 2001

M131

A8.14n

306

93-101

9 bp deletion

cacacccagaatacaataatttt

ctttttattctacaagtgtacattttc

Underhill et al. 2001

M132

B9.67b

568

482

G->T

aacagaattatcaggaaaaggttt

ttttacttgttcgtgtactttcaa

Underhill et al. 2001

M133

A8.08F-newR

211

116

1bp (T) deletion

tgaaatggaaatcaataaactcagt

ccttttctttttctttaacccttc

Underhill et al. 2001

M134

 A8.08newF-R

232

54

 -1bp

agaatcatcaaacccagaagg

tctttggcttctctttgaacag

Underhill et al. 2001

M135

A8.08F-newR

211

150

 +1bp

tgaaatggaaatcaataaactcagt

ccttttctttttctttaacccttc

Underhill et al. 2001

M136

 B9.61

339

196

C->T

atgtgaagacaacactgtgtgg

ttgtggtagtcttagttctcatgg

Underhill et al. 2001

M137

G3.27d

393

289

T->C

tggtaaactctacttagttgccttt

cagcgaattagattttcttgc

Underhill et al. 2001

M138

A8.17

442

291

C->T

aacttccaaaactgtgaaaagatt

gattaaagcagccccttcag

Underhill et al. 2001

M139

 A8.28a

459

401

5G->4G

ttactgataatgccatattgttttg

ttctcagacaccaatggtcct

Underhill et al. 2001

M141

A8.30a

424

51

T->A

catcttaaaatacatttcatagcttt

gcttactattaggtctagcatcct

Underhill et al. 2001

M143

B9.50b

385

246

G->T

atgctataataactaggtgttgaag

aattcagcttttaccacttctgaa

Underhill et al. 2001

M144

 B9.99

452

342

T->C

agcacaagggtcacattgag

 aggacaaggctttttgttgtt

Underhill et al. 2001

M145

 A8.05b

208

166

G->A

ttcagcaagagtaagcaagagg

 cctttttggatcatggttctt

Underhill et al. 2001

M146

G3.04d

395

141

A->C

gaatggggtgttacatggaga

 cctattatgagagacctgttttcc

Underhill et al. 2001

M147

G3.35

439

116

1 bp insertion (extra T)

gtattctggggcaattttagg

ttgatacaagaggttattttaagca

Underhill et al. 2001

M148

B9.67c

568

314

A->G

aacagaattatcaggaaaaggttt

ttttacttgttcgtgtactttcaa

Underhill et al. 2001

M149

 B9.67d

568

469

G->A

aacagaattatcaggaaaaggttt

ttttacttgttcgtgtactttcaa

Underhill et al. 2001

M150

B9.18

289

146

C->T

gcagtggagatgaagtgagac

cctactttccccctcttctg

Underhill et al. 2001

M151

 B9.58b

422

209

G->A

acttaatttatagtttcaatccctca

ttcatggagatgtctgtatctgg

Underhill et al. 2001

M152

B9.13

287

101

C->T

aagctattttggtttcctttca

gccttgtgtgggtatgattg

Underhill et al. 2001

M153

A8.28c

459

427

T->A

ttactgataatgccatattgttttg

ttctcagacaccaatggtcct

Underhill et al. 2001

M154

B9.58c

422

252

T->C

acttaatttatagtttcaatccctca

 ttcatggagatgtctgtatctgg

Underhill et al. 2001

M155

 G10.57c

327

251

G->A

tctctaacttctgtgagccac

ggaaaaactaaactctaaatctct

Underhill et al. 2001

M156

A8.05c

208

147

A->G

ttcagcaagagtaagcaagagg

 cctttttggatcatggttctt

Underhill et al. 2001

M157

B9.12b

352

176

A->C

gctggcaagacacttctga

aatatgttcctgacaccttcc

Underhill et al. 2001

M158

 A8.08F-newR

211

77

G->A

tgaaatggaaatcaataaactcagt

ccttttctttttctttaacccttc

Underhill et al. 2001

M159

G10. 83new b

190

89

A->C

attggattgatttcagccttc

attttattttctgtgttccttgc

Underhill et al. 2001

M160

 B9.47b

361

251

A->C

cagaataataggagaatttttggt

 attttccttattttctaagcagc

Underhill et al. 2001

M161

A8.05d

460

111

C->A

tcacagcagcttcagcaaa

cctttttggatcatggttctt

Underhill et al. 2001

M163

G10.35b

340

168

A->C

gcagcatataaaactttcagg

aaaacctaactttgctcaagc

Underhill et al. 2001

M164

 G10.100b

493

329

T->C

tagaagtagcagattgggagagg

cctgataaaatgaaaaaaatggtc

Underhill et al. 2001

M165

B9.008c

340

132

A->G

aaagcgagagattcaatccag

 ttttagcaagttaagtcaccagc

Underhill et al. 2001

M166

G3.27e

393

53

G->A

tggtaaactctacttagttgccttt

cagcgaattagattttcttgc

Underhill et al. 2001

M168

DFFRY Ex01B site a

473

371

C->T

agtttgaggtagaatactgtttgct

aatctcataggtctctgactgttc

Underhill et al. 2001

M169

DFFRY Ex01B siteb

473

97

T->C

agtttgaggtagaatactgtttgct

ccagggccccgagggactctt

Underhill et al. 2001

M170

DFFRY Exon08

405

327

A->C

tgcttcacacaaatgcgttt

ccaattactttcaacatttaagacc

Underhill et al. 2001

M171

DFFRY Ex01B sitec

473

440

G->C

agtttgaggtagaatactgtttgct

 ccagggccccgagggactctt

Underhill et al. 2001

M172

DFFRY Ex45

345

197

T->G

ttgaagttacttttataatctaatgctt

ataatttattactttacagtcacagtgg

Underhill et al. 2001

M173

DBY Ex08

417

191

A->C

aagaaatgttgaactgaaagttgat

aggtgtatctggcatccgtta

Underhill et al. 2001

M174

DffryEx38

348

219

T->C

acatctcagatcgttgtttggt

 aaaaagccatgcaattacctg

Underhill et al. 2001

M175

UTY1 exon 07

444

84-88

 -5bp

ttgagcaagaaaaatagtaccca

ctccattcttaactatctcaggga

Underhill et al. 2001

M178

 G10.72b

514

220

T->C

taagcctaaagagcagtcagag

cagagggagcaatgaggaca

Underhill et al. 2001

M179

Dffry exon 07

426

316

C->T

attatgcagaattaagatgaccag

agacaggttcacatcactaatgg

Underhill et al. 2001

M180

Dffry exon 11

447

402

T->C

acactactgtgctgtaatttgtgaa

tggtaagatttctctacatgaacag

Underhill et al. 2001

M181

 Dffry exon 12

294

130

T->C

gcttttatttattctacttttgttttt

 aacaatgaccaattctttttcat

Underhill et al. 2001

M182

Dffry exon 13

364

38

C->T

tattcaaagacttaaagcagtggtta

 ggaatcatcttgtaactaagttatcct

Underhill et al. 2001

M183

Dffry exon 19

427

324

A->C

actgggtaaatatgactatgattgag

ttccttttaacctattattactttcc

Underhill et al. 2001

M184

Dffry exon 23

305

62

G->A

cactttattttagtctgtgtctttttc

aaacttagtaacatctatttctcctct

Underhill et al. 2001

M185

Dffry exon 27

430

89

C->T

ggagtacctatcactgaatgtgc

gtcattcatttctgcttggaac

Underhill et al. 2001

M186

Dffry exon 30

365

62

1 bp deletion

ttgcatttactgttctagagagttct

gtacttactttaatgagattagcac

Underhill et al. 2001

M188

Dffry exon 31

401

185

C->T

gtattccctttgaagaaacatattg

aagtccatcacaagttaattttttc

Underhill et al. 2001

M189

Dffry exon 34

378

191

G->T

actctcagcttatgtttgtcattg

gcttttggtacactctgctttt

Underhill et al. 2001

M190

Dffry exon 44

346

73

A->G

ctctgtcacaagtaaggaaatgat

ctgtccattggtagccttttt

Underhill et al. 2001

M191

DBY exon 2

429

342

T->G

ttgcatttgtcatggttggt

gccaggataattttttgtattttc

Underhill et al. 2001

M192

DBY STS 02

457

202

C->T

catgggctgctgacatttt

aaatccttttggtttgtttgttt

Underhill et al. 2001

M193

DBY STS 03a

426

56

4 bp insertion

gcctggatgaggaagtgag

gccttctccatttttgacct

Underhill et al. 2001

M194

 DBY STS 03b

426

101

T->C

gcctggatgaggaagtgag

gccttctccatttttgacct

Underhill et al. 2001

M195

DBY STS 06

515

430

A->G

ccactcagctttcctcaggt

cgttcgtttagtcataagatcg

Underhill et al. 2001

M196

DBY STS 07

445

330

C->G

ttagacaacttactactttgatgtcct

taaacattacatgagaaattgctgt

Underhill et al. 2001

M197

DBY exon 07

408

105

T->C

tcagacagtttagttggttacttcc

aagacacatcctcagctaatcttt

Underhill et al. 2001

M198

DBY STS 08

444

45

C->T

tgaggtggaatgtatcagtatacc

tgatttcaaggatttgttagtctt

Underhill et al. 2001

M199

DBY STS 08

444

404

1 bp insertion (extra G)

tgaggtggaatgtatcagtatacc

tgatttcaaggatttgttagtctt

Underhill et al. 2001

M200

DBY STS 09

429

318

G->A

ggcttacacttgcagactttg

ggagaaatgtacaagagtctaaacc

Underhill et al. 2001

M201

DBY exon 11&12

326

136

G->T

tatgcatttgttgagtatatgtc

gttctgaatgaaagttcaaacg

Underhill et al. 2001

M202

DBY exon 16

392

259

T->G

ggaattgcagggtttaagc

 gccacccacctgtaatcc

Underhill et al. 2001

M203

UTY1 exon01

503

248

G->C

gagtgccaagctgaggatga

2 sequnces for this primer

Underhill et al. 2001

M204

UTY1 ex 02 = Intron 1

286

234

T->G

aaggggcgaagtattccag

tgaagaggagtctgttagcctg

Underhill et al. 2001

M205

UTY Intron 2a

541

78

T->A

gtataatactgtggttggaaagca

ccaaactatgtgataataaatggg

Underhill et al. 2001

M206

UTY Intron 2b

541

31

T->G

gtataatactgtggttggaaagca

ccaaactatgtgataataaatggg

Underhill et al. 2001

M207

UTY1 ex03 = Intron 3a

423

79

A->G

aggaaaaatcagaagtatccctg

caaaattcaccaagaatccttg

Underhill et al. 2001

M208

UTY1 = Intron 3b

507

352

C->T

ataaatacaaaatcacctgatggat

ttaaacagcgaaattactaacaaaa

Underhill et al. 2001

M209

UTY1 = Intron 3c

550

471

A->G

cactgtcttccacaatggttg

aggtgattttgtatttatcttccc

Underhill et al. 2001

M210

UTY1 = Intron 3d

550

461

A->T

cactgtcttccacaatggttg

aggtgattttgtatttatcttccc

Underhill et al. 2001

M211

UTY1 = Intron 4a

538

381

C->T

caattcactatttgaggaatcca

gaagtctctgatttatttggcag

Underhill et al. 2001

M212

UTY1 ex05a

409

234

C->A

tataatcaagttaccaattactggc

ttttgtaacattgaatggcaaa

Underhill et al. 2001

M213

UTY1 ex05b=Intron 4c

409

290

T->C

tataatcaagttaccaattactggc

ttttgtaacattgaatggcaaa

Underhill et al. 2001

M214

UTY1 ex12 = Intron 11

460

404

T->C

tattacaaaatatggaaacaaggc

gaaatgccacttcactccag

Underhill et al. 2001

M215

UTY1 exon 14

386

163

A->G

gtaaaactcagatatatacatcccatg

aaaaaaaaagaatcactatcttaacg

Underhill et al. 2001

M216

UTY1 intron 18

557

54

C->T

ctcaaccagtttttatgaagctag

gagagtctgaactaatgtgtcttgt

Underhill et al. 2001

M217

UTY1 intron 17

461

219

A->C

gcttatttttagtctctcttccat

acctgttgaatgttacatttcttt

Underhill et al. 2001

M218

UTY1 intron 16

482

380

C->T

ttgtgagtttttttccatcaatc

tttattgacgatggtattagaagag

Underhill et al. 2001

M219

UTY1 intron 16

482

232

T->C

ttgtgagtttttttccatcaatc

tttattgacgatggtattagaagag

Underhill et al. 2001

M220

 UTY1 intron 16

482

367

A->G

ttgtgagtttttttccatcaatc

tttattgacgatggtattagaagag

Underhill et al. 2001

M221

UTY1 intron 18

324

200

G->A

gggaaatgtgaaaggaaaata

ttaaacttttataacactgacagaaac

Underhill et al. 2001

M223

A8.05e

208

67

C->T

ttcagcaagagtaagcaagagg

cctttttggatcatggttctt

Underhill et al. 2001

M224

 B9.60b

301

193

T->C

cttcaggcattattttttttggt

atagtgttccttcacctttcctt

Underhill et al. 2001

YAP

DYS287

599(Alu+)

 

Alu- ->Alu+

caggggaagataaagaaata

aagccactattagacaacct

Hammer and Horai 1995

P1

DYS287

858

230

C->T

aggagaagtgggagtaaga

actgctaaaaggggatggat

Hammer et al. 1998

P2

DYS287

536

153

C->T

gatgcaaatgagaaagaact

ctaaaaactggagggagaaa

Hammer et al. 1998

P3

DYS287

536

397

G->A

gatgcaaatgagaaagaact

ctaaaaactggagggagaaa

Hammer et al. 1998

P4

DYS7

160

108

C->T

tggtctcaggaagtttttgc

gagagtcataatgccgacgt

Hammer et al. 2001

P5

DYS389

624

36

C->T

aacccctgccacaaatacat

tctggaacccctggagagatc

present paper

P6

DYS265

122

83

G->C

ctgaaggtggccatttctta

ccatctggctcaatggttag

Hammer et al. 2001

P7

DYS194

327

60

T->C

atgcctacaaaatgacac

ccaacaatatgtcacaatctc

Hammer et al. 2001

P8

DYS190

661

461

G->A

agggagatgagaagacac

cgtggcatcttgtcatgtct

Hammer et al. 2001

P9

486 Ya5

475

319

C->A

tgtggtaagtgtagtttcaa

tctggactggaaacataa

Hammer et al. 2001

P14

DYS188

741

361

C->T

tttcagagtttctctact

tttttttttaatatgaggg

Hammer et al. 2000

P15

DYS221

191

138

C->T

agagagttttctaacagggcg

tgggaatcacttttgcaact

Hammer et al. 2000

P16

DYS211

169

105

A->T

aggctccatctgtagcacac

taaccttatagaccaaccccg

Hammer et al. 2000

P18

DYS194

697

208

C->T

tggatctgattcacaggtag

ccaacaatatgtcacaatctc

present paper

P19

DYS190

661

478

T->G

agggagatgagaagacac

cgtggcatcttgtcatgtct

Hammer et al. 2001

P20

DYS194

697

158

C deletion

tggatctgattcacaggtag

ccaacaatatgtcacaatctc

present paper

P21

DYS194

819

759

C->A

tagccctttgtcttgattacag

gtgctaggtccaaatatg

present paper

P22

DYS257

369

169

G/A->A

gcttcaggaacttgtcgg

aggacccaattattgcacac

Hammer et al. 2001

P25

DYS194

327

79

C->A

atgcctacaaaatgacac

ccaacaatatgtcacaatctc

Hammer et al. 2000

P27

DYS257

369

115

G->A

gcttcaggaacttgtcgg

aggacccaattattgcacac

Hammer et al. 2001

P28

16E4 Ya5

519

410

C->T

gaagcaatactctgaaaagt

tttggagggacattattctc

Hammer et al. 2001

P29

ARSDP

684

534

A->C

ggtgggctgtttgaaaaaga

agccaaataccagtcgtcac

present paper

P31

ARSDP

703

126

T->C

taaggctgcgtgttccctat

gcactgtcactgtggatgtt

Hammer et al. 2001

P33

DYS194

819

718

T->C

tagccctttgtcttgattacag

gtgctaggtccaaatatg

Hammer et al. 2001

P36

ARSDP

637

217

G->A

tgaaggacagtaagtacaca

taagtccattgatctacaga

present paper

P37

ARSDP

447

135

T->C

cgtctatggccttgaaga

tccgaaaatgcagacttt

Karafet et al. 2001

P44

ARSDP

703

134

G->A

taaggctgcgtgttccctat

gcactgtcactgtggatgtt

present paper

SRY4064

SRY

612

258

G->A

gcattttgttacccttctcaac

tggcaagacttacgagatttc

Hammer et al. 1998

SRY9138

SRY

1,067

363

C->T

tttaacattgacaggaccag

gacaaccaagaagaggaacc

Hammer et al. 1998

SRY10831a

SRY

536

135

A->G

ccacaacctctttcatc

aataaaaatcccgtaaaata

Hammer et al. 1998

SRY10831b

SRY

536

135

G->A

ccacaacctctttcatc

aataaaaatcccgtaaaata

Hammer et al. 1998

92R7

92R7

722

504

G->A

gacccgctgtagacctgact

gcctatctacttcagtgatttct

Hurles et al. 1999

Tat

RBF5

112

28

T->C

gactctgagtgtagacttgtga

gaaggtgccgtaaaagtgtgaa

Zerjal et al. 1997

Apt

50f2/E

850

419

G->A

tggattgcattcaacttcacttac

ctgagttcaaatgctcgggtctc

Pandya et al. 1998

LINE1

DYZ3

~140 (LINE+)

LINE- -> LINE+

gcacaatgtgcacatgtacccta

tgatgtgtgcattcatctcatatat

Santos et al. 2000

MSY2

DYS440

499/400

 

4->3

ctggctttggggacgtagta

ctgcgctttatgagcatacg

Bao et al. 2000

SRY-2627

SRY

1242

299

C->T

aggtcttttttgccttctta

atgcacggtttcttttga

Veitia et al. 1997

SRY+465

SRY

148

52

C->T

gccgaagaattgcagtttgc

gttgatgggcggtaagtggc

Shinka et al. 1999

47z

DXYS5Y

381

291

G->C

tgagtcaatgtcaatgaatc

tagttacgccttg(g)cataac

Shinka et al. 1999

MEH1

50f2/E

687

330

C->G

gtgcatctattgactctttcatgg

caccaccatgtcccacagatttg

present paper

MEH2

PCDHY intron 4

938

880

G->T

attcataatatttgattcagaacag

taccatgaaaattcataatccaca

present paper

50f2(P)

50f2/E

687

547

G->C

caccaccatgtcccacagatttg

gtgcatctattgactctttcatgg

present paper

12f2

DYS11

88

 

present->absent

ctgactgatcaaaatgcttacagatc

ggatcccttccttacaccttatac

Rosser et al. 2000