Supplementary Data - A table listing of all published markers and primer information included in this survey.
|
Mutation Name |
Region/STS |
Size (bp) |
Site |
mutation |
Forward Primer |
Reverse Primer |
reference |
|
M2 |
DYS271 |
209 |
168 |
A->G |
aggcactggtcagaatgaag |
aatggaaaatacagctcccc |
Seielstad et al. 1994 |
|
M3 |
DYS199 |
241 |
181 |
C->T |
taatcagtctcctcccagca |
aaaattgtgaatctgaaatttaagg |
Underhill et al. 1996 |
|
M4 |
DYS234 |
273 |
88 |
A->G |
tcctaggttatgattacagagcg |
acgtcttgtaaacatgacaagg |
Underhill et al. 1997 |
|
M5 |
DYS214a |
322 |
73 |
C->T |
gggtttatactgacctgccaatgtt |
ttattgggaactttcagggg |
Underhill et al. 1997 |
|
M6 |
DYS198 |
218 |
37 |
T->C |
cactaccacatttctggttgg |
cgctgagtccattctttgag |
Underhill et al. 1997 |
|
M7 |
DYS253 |
300 |
236 |
C->G |
actgtgagcgagctgaaaat |
gcagccttgtgaaccaatta |
Underhill et al. 1997 |
|
M8 |
DYS263 |
267 |
137 |
G->T |
cccacccacttcagtatgaa |
aggctgacagacaagtccac |
Underhill et al. 1997 |
|
M9 |
G10.35a |
340 |
68 |
C->G |
gcagcatataaaactttcagg |
gcttgagcaaagttaggtttt |
Underhill et al. 1997 |
|
M10 |
G10.10 |
343 |
156 |
T->C |
gcattgctataagttacctgc |
taataaaaattgggtcaccc |
Underhill et al. 1997 |
|
M11 |
G10.37 |
222 |
44 |
A->G |
tctctctgtctgtctctccctcc |
gagcataaacaagaacttactgagc |
Underhill et al. 1997 |
|
M12 |
DYS260a |
309 |
286 |
G->T |
actaaaacaccattagaaacaaagg |
ctgagcaacatagtgacccc |
Underhill et al. 1997 |
|
M13 |
G10.06 |
233 |
157 |
G->C |
tcctaacctggtggtctttc |
tgagccatgattttatccaac |
Underhill et al. 1997 |
|
M14 |
G10.07 |
287 |
180 |
T->C |
agacggttagatcagttctctg |
tagataaaagcacattgacacc |
Underhill et al. 1997 |
|
M15 |
G10.16 |
295 |
304 |
9 bp insertion |
acaaatcctgaacaatcgc |
tgcatgtggttaaaatttcc |
Underhill et al. 1997 |
|
M16 |
DYS214b |
266 |
38 |
C->A |
tgttatgtcatttgaacccag |
ccgtgtgttgctgggctgt |
Underhill et al. 1997 |
|
M17 |
G10.47a |
333 |
68 |
4G->3G |
ctggtcataacactggaaatc |
tgaacctacaaatgtgaaact |
Underhill et al. 1997 |
|
M18 |
G10.47b |
333 |
62 |
2 bp insertion |
ctggtcataacactggaaatc |
tgaacctacaaatgtgaaactc |
Underhill et al. 1997 |
|
M19 |
G10.47c |
333 |
131 |
T->A |
ctggtcataacactggaaatc |
tgaacctacaaatgtgaaactc |
Underhill et al. 1997 |
|
M20 |
G10.48 |
413 |
118 |
A->G |
gattgggtgtcttcagtgct |
cacacaacaaggcaccat |
Underhill et al. 1997 |
|
M21 |
G10.43 |
415 |
357 |
A->T |
cttttatttctgactacaggg |
aacagcagatttgagcagg |
Underhill et al. 1997 |
|
M22 |
DYS273 |
327 |
129 |
A->G |
agaagggtctgaaagcaggt |
gcctactacctggaggctt |
Underhill et al. 1997 |
|
M23 |
G10.57a |
327 |
159 |
A->G |
tctctaacttctgtgagccac |
ggaaaaactaaactctaaatctct |
Underhill et al. 2001 |
|
M25 |
B9.008b |
340 |
121 |
G->C |
aaagcgagagattcaatccag |
ttttagcaagttaagtcaccagc |
Underhill et al. 2001 |
|
M26 |
B9.005 |
321 |
68 |
G->A |
ccagtggtaaagttttattacaattt |
ttcacagtaagcaggcaatcc |
Underhill et al. 2001 |
|
M27 |
G10.65 |
526 |
398 |
C->G |
cggaagtcaaagttatagttactgg |
cactgctgttctgtctaccaca |
Underhill et al. 2001 |
|
M28 |
G10.33n |
332 |
277 |
T->G |
gcttacttgggacacaggct |
agagaagttgtcatacgataatgg |
Underhill et al. 2001 |
|
M30 |
G10.66a |
486 |
132 |
G->A |
gaaccagacaatacgaaatagaag |
tttagcggcttatctcattacc |
Underhill et al. 2001 |
|
M31 |
G10.66b |
486 |
71 |
G->C |
gaaccagacaatacgaaatagaag |
tttagcggcttatctcattacc |
Underhill et al. 2001 |
|
M32 |
G10.68a |
370 |
166 |
T->C |
ttgaaaaaatacagtggaac |
caagtgtttaaggatacaga |
Underhill et al. 2001 |
|
M33 |
G10.68b |
370 |
180 |
A->C |
ttgaaaaaatacagtggaac |
caagtgtttaaggatacaga |
Underhill et al. 2001 |
|
M34 |
G10.69 |
372 |
131 |
G->T |
cacttcacatttgtttttagg |
agtcattatttagtcattccag |
Underhill et al. 2001 |
|
M35 |
G10.72a |
513 |
168 |
G->C |
taagcctaaagagcagtcagag |
agagggagcaatgaggaca |
Underhill et al. 2001 |
|
M36 |
G10.82a |
436 |
74 |
T->G |
agatcatcccaaaacaatcataa |
aaggctgaaatcaatccaatctg |
Underhill et al. 2001 |
|
M37 |
G10.STS 84 |
422 |
203 |
C->T |
cagattggattgatttcagcctt |
agcatacaaaaaaaaaaaactgc |
Underhill et al. 2001 |
|
M38 |
G10.73a |
337 |
146 |
T->G |
cagtttttagagaataatgtcct |
ttaaagaaaagaaaagcagatg |
Underhill et al. 2001 |
|
M39 |
G10.73a |
337 |
236 |
C deletion |
cagtttttagagaataatgtcct |
ttaaagaaaagaaaagcagatg |
Underhill et al. 2001 |
|
M42 |
B9.008a |
340 |
297 |
A->T |
aaagcgagagattcaatccag |
ttttagcaagttaagtcaccagc |
Underhill et al. 2001 |
|
M43 |
DYS260b |
309 |
77 |
A->G |
actaaaacaccattagaaacaaagg |
ctgagcaacatagtgacccc |
Underhill et al. 2001 |
|
M44 |
G10.87 |
389 |
263 |
G->C |
ctggcaccttctgatattttgag |
tgtgatttctatgtgtttgaggac |
Underhill et al. 2001 |
|
M45 |
B9.12 |
352 |
109 |
G->A |
gctggcaagacacttctgag |
aatatgttcctgacaccttcc |
Underhill et al. 2001 |
|
M47 |
G10.82b |
436 |
395 |
G->A |
agatcatcccaaaacaatcataa |
aaggctgaaatcaatccaatctg |
Underhill et al. 2001 |
|
M48 |
G10.79n |
240 |
160 |
A->G |
aaacaatatgtatgctaattttgct |
tcaatgtaaatgttagtataaggatg |
Underhill et al. 2001 |
|
M49 |
B9.15new a |
354 |
229 |
T->C |
cggcaacagtgaggacagt |
tgcttcaggagatagaggctc |
Underhill et al. 2001 |
|
M50 |
B9.15new b |
354 |
175 |
T->C |
cggcaacagtgaggacagt |
tgcttcaggagatagaggctc |
Underhill et al. 2001 |
|
M51 |
B9.16 |
339 |
33 |
G->A |
gagcctctatctcctgaagc |
tgactgctctgttgcgaca |
Underhill et al. 2001 |
|
M52 |
G10.88 |
534 |
477 |
A->C |
actgtagcatggtcatctagggtg |
gacgaagcaaacatttcaagagag |
Underhill et al. 2001 |
|
M54 |
B9.17 |
360 |
164 |
G->A |
cctcctctggtctgggttt |
tgtgtcaggactggttccat |
Underhill et al. 2001 |
|
M55 |
B9.28 |
382 |
228 |
T->C |
cgtaggcgtttgacagcag |
cctttcttcgtaatcctccc |
Underhill et al. 2001 |
|
M56 |
B9.29 |
399 |
39 |
A->T |
ccagaaactgaagtacaaatgc |
tctcattgctgcctctcttt |
Underhill et al. 2001 |
|
M57 |
G10.85n |
326 |
133 |
+1bp |
attgggaggaagtggtttctg |
gttctgtatcttttccattatttgc |
Underhill et al. 2001 |
|
M58 |
G10.57b |
327 |
224 |
G->A |
tctctaacttctgtgagccac |
ggaaaaactaaactctaaatctct |
Underhill et al. 2001 |
|
M59 |
B9.15new c |
354 |
179 |
A->C |
cggcaacagtgaggacagt |
tgcttcaggagatagaggctc |
Underhill et al. 2001 |
|
M60 |
B9.34 |
388 |
242 |
+1bp |
gcactggcgttcatcatct |
atgttcattatggttcaggagg |
Underhill et al. 2001 |
|
M61 |
G10.83new a |
190 |
98 |
C->T |
attggattgatttcagccttc |
attttattttctgtgttccttgc |
Underhill et al. 2001 |
|
M62 |
DYS260c |
309 |
60 |
T->C |
actaaaacaccattagaaacaaagg |
ctgagcaacatagtgacccc |
Underhill et al. 2001 |
|
M63 |
B9.22 |
308 |
43 |
G->A |
ctcttcccttggttcctattc |
ttaggcagaagcatccacc |
Underhill et al. 2001 |
|
M64 |
B9.t23 |
325 |
279 |
A->G recurrent |
tatagaccctgactactcaagagaa |
ggtagccctttccagtctgt |
Underhill et al. 2001 |
|
M65 |
B9.t26 |
436 |
152 |
A->T |
ttctgatgccagcttgttcg |
gctacgggattaaagtaaccttg |
Underhill et al. 2001 |
|
M66 |
B9.41 |
415 |
135 |
A->C |
ctgtgtaacaccatcaagtgc |
acatcttctggagacatacttcc |
Underhill et al. 2001 |
|
M67 |
B9.36new a |
409 |
377 |
A->T |
ccatattctttatactttctacctgc |
gtcttttcacttgttcgtggac |
Underhill et al. 2001 |
|
M68 |
B9.36new b |
409 |
268 |
A->G |
ccatattctttatactttctacctgc |
gtcttttcacttgttcgtggac |
Underhill et al. 2001 |
|
M69 |
B9.62a |
257 |
222 |
T->C |
ggttatcatagcccactatactttg |
atctttattccctttgtcttgct |
Underhill et al. 2001 |
|
M70 |
B9.62b |
257 |
45 |
A->C |
ggttatcatagcccactatactttg |
atctttattccctttgtcttgct |
Underhill et al. 2001 |
|
M71 |
B9.6 3b |
328 |
197 |
C->T |
ttgaattatagtcccttgcctc |
gcttcttttctgtgatggctg |
Underhill et al. 2001 |
|
M72 |
B9.6 3a |
328 |
157 |
A->G |
ttgaattatagtcccttgcctc |
gcttcttttctgtgatggctg |
Underhill et al. 2001 |
|
M73 |
B9.47a |
361 |
260 |
2bp deletion |
cagaataataggagaatttttggt |
attttccttattttctaagcagc |
Underhill et al. 2001 |
|
M74 |
B9.50a |
385 |
195 |
G->A |
atgctataataactaggtgttgaag |
aattcagcttttaccacttctgaa |
Underhill et al. 2001 |
|
M75 |
B9.51 |
355 |
296 |
G->A |
gctaacaggagaaataaattacaga |
tattgaacagaggcatttgtga |
Underhill et al. 2001 |
|
M76 |
G10.100a |
493 |
339 |
T->G |
tagaagtagcagattgggagagg |
cctgataaaatgaaaaaaatggtc |
Underhill et al. 2001 |
|
M77 |
G10.105 |
371 |
129 |
C->T |
cttttcttcccttagctgttcc |
gcaacaatgacaggtcaacc |
Underhill et al. 2001 |
|
M78 |
B9.60a |
301 |
197 |
C->T |
cttcaggcattattttttttggt |
atagtgttccttcacctttcctt |
Underhill et al. 2001 |
|
M81 |
B9.58a |
422 |
147 |
C->T |
acttaatttatagtttcaatccctca |
ttcatggagatgtctgtatctgg |
Underhill et al. 2001 |
|
M82 |
B9.t18 |
328 |
179 |
-2bp |
ctgtactcctgggtagcctgt |
aagaacgattgaacacactaactc |
Underhill et al. 2001 |
|
M83 |
B9. Alu01 |
503 |
120 |
C->T |
gggaaaggagttatccagaaa |
aatgacccatgcttacttagc |
Underhill et al. 2001 |
|
M85 |
B9.67a |
568 |
437 |
C->A |
aacagaattatcaggaaaaggttt |
gcaatatacgtttctgcttcca |
Underhill et al. 2001 |
|
M86 |
B9.t25a |
324 |
85 |
T->G |
tcccattatttgctatatttgct |
tttctcatttaacttttctgaccc |
Underhill et al. 2001 |
|
M87 |
B9.t25b |
324 |
277 |
T->C |
tcccattatttgctatatttgct |
tttctcatttaacttttctgaccc |
Underhill et al. 2001 |
|
M88 |
B9.80 |
314 |
166 |
A->G |
attctagggtcaggcaactagg |
tgtttgttctattctatggtcttcc |
Underhill et al. 2001 |
|
M89 |
B9.94 |
527 |
347 |
C->T |
agaagcagattgatgtcccact |
tccagttaggagatcccctca |
Underhill et al. 2001 |
|
M90 |
B9.96 |
331 |
170 |
C->G |
tgatgtttcttcagtctttgagg |
aagatgaatcctgctaccacc |
Underhill et al. 2001 |
|
M91 |
B9.87a |
495 |
368 |
9T->8 T |
gagcttggactttaggacgg |
aaactttaaggcacttctggc |
Underhill et al. 2001 |
|
M92 |
B9.G2 |
470 |
340 |
T->C |
ttgaatttcccagaattttgc |
ttcagaaactggttttgtgtcc |
Underhill et al. 2001 |
|
M93 |
B9.93 |
504 |
459 |
C->T |
aacaaaacaaaacaaaaatactga |
ggttcacttgaagatagtttaggtta |
Underhill et al. 2001 |
|
M94 |
B9.122 |
405 |
227 |
C->A |
cacatggagaacagagaaatgc |
cttgtgaaatgttgtgaaagtgg |
Underhill et al. 2001 |
|
M95 |
B9.123 |
480 |
172 |
C->T |
gagtggaaatcaagatgccaag |
gggctttctgtaacctggaga |
Underhill et al. 2001 |
|
M96 |
G3.05a |
440 |
70 |
G->C |
gttgccctctcacagagcac |
aaggtcactggaaggattgc |
Underhill et al. 2001 |