v2002.01.18

 

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Table 2. Details of the markers incorporated within seven published prior nomenclature systems, illustrated in Figure 1.

                                                                                                                                                             

System         Name  Derived state at      Ancestral State at                    Name by lineage

                                                                                                                                                             

Tyler-Smith   1          92R7                         M3, SRY10831b, SRY-2627            P*(xR1b8,R1a,Q3)

& Jobling       2          SRY10831a                  50f2(P), RPS4Y711, YAP,

(2000)                                                        Apt, M52, 12f2a, M9                BR*(xB2b,CE,F1,H,JK)

                     3          SRY10831b                                                                    R1a

                     4          YAP                         SRY4064                                    DE*(xE)

                     5          47z                                                                             O2b1

                     6          50f2(P)                                                                       B2b

                     7                                           SRY10831a, MEH1                      Y*(xBR,A2)

                     8          M2                                                                             E3a

                     9          12f2a                                                                          J

                     10        RPS4Y711                                                                   C

                     12        LLY22g                    Tat                                             N*(xN3)

                     13        LINE1                                                                        O3c

                     15        Apt                                                                             F1

                     16        Tat                                                                              N3

                     18        M3                                                                             Q3

                     20        SRY+465                    47z                                            O2b*

                     21        SRY4064                     P2                                             E*(xE3)

                     22        SRY-2627                                                                     R1b8

                     23        SRY9138                                                                   K1

                     24        M4                                                                             M

                     25        P2                             M2                                            E3*(xE3a)

                     26        M9                            SRY9138, M20, M4, LLY22g,

                                                                  SRY+465, LINE1, 92R7              K*(xK1,LN,O2b,O3c,P)

                     27        MEH1                                                                        A2

                     28        M20                                                                           L

                     35        M52                                                                           H

Underhill        I           M91                                                                           A

(2000)           II          M60                                                                           B

                     III        M96                                                                           E

                     IV        M174                                                                         D

                     V         RPS4Y711                                                                   C

                     VI        M89                          M9                                            F*(xK)

                     VII       M175                                                                         O

                     VIII      M9                            M175, M45                               K*(xO,P)

                     IX        M173                                                                         R1

                     X         M45                          M173                                        P*(R1)

Hammer        1A                                        P3, SRY10831a                             Y*(xBR,A2)

(2001)           2          P3                                                                              A2

                     1B        SRY10831a                  RPS4Y711, YAP, P14                BR*(xF,DE,C)

                     1C       P27                           SRY10831b, P25, M3                   P*(xR1a,R1b,Q3)

                     1D       SRY10831b                                                                    R1a

                     1E        SRY9138                                                                   K1

                     1F        RPS4Y711                                                                   C

                     1G       M3                                                                             Q3

                     1Ha      P15                           P16                                           G2*

                     1Hb     P16                                                                            G2a

                     1I         Tat                                                                              N3

                     1L        P25                                                                            R1b

                     1U       M9                            P27, Tat                                    K*(xP,N3)

                     1R        P14                           12f2a, P15, M9                         F*(xJ,G2,K)

                     3G       YAP                         SRY4064                                     DE*(xE)

                     3A       SRY4064                     P2                                             E*(xE3)

                     4          P2                             P1                                             E3*(xE3a)

                     5          P1                                                                              E3a

                     Med     12f2a                                                                          J

Karafet          1                                           SRY10831a, M13, P3, P4,

(2001)                                                        M6, M14                                   Y*(xBR,A2,A3b2)

                     2          M13                                                                           A3b2

                     3          P4, P3, M6, M14      SRY10831a                                   A2*(xA2b)

                     4          P28                           SRY10831a                                   A2b

                     5          SRY10831a                  P9, 50f2(P)                                BR*(xCR,B2b)

                     6          50f2(P)                     P6, P7, P8, MSY2a                   B2b*(xB2b1,B2b4)

                     7          P6                                                                              B2b1

                     8          P7                             P8, MSY2a                               B2b4*

                     9          MSY2a                                                                      B2b4b

                     10        P8                                                                              B2b4a

                     11        M174                        M15                                          D*(xD1)

                     12        M15                                                                           D1

                     13        SRY4064                     P2, P1                                       E*(xE3)

                     14        P2                             P1                                             E3*(xE3a)

                     15        P1                                                                              E3a

                     16        RPS4Y711, M216      M8, M217, P33                        C*(xC1,C2a,C3)

                     17        M217                                                                         C3

                     18        P33                                                                            C2a

                     19        M8                                                                             C1

                     20        P14                           P15, P19, 12f2, M9                   F*(xG2,I,J,K)

                     21        P19                                                                            I

                     22        P15                                                                            G2

                     23        12f2a                        M172                                        J*(xJ2)

                     24        M172                                                                         J2

                     25        M9                            M20, M4, Tat, M175, P27        K*(xL,M,N3,O,P)

                     26        Tat                                                                              N3

                     27        M20                                                                           L

                     28        M175                        M119, P31, M122                    O*

                     29        M122                        LINE-1, M134                          O3*(xO3c,O3e)

                     30        M134                                                                         O3e

                     31        LINE-1                                                                      O3c

                     32        M119, MSY2b                                                           O1

                     33        P31                           M95, SRY+465                           O2*

                     34        M95                                                                           O2a

                     35        SRY+465                    47z                                            O2b*

                     36        47z                                                                             O2b1

                     37        M4, M5                    P22                                           M*(xM2)

                     38        P22                           M16                                          M2*(xM2a)

                     39        M16                                                                           M2a

                     40        P27                           M207                                        P*(xQ3,R)

                     41        M3                                                                             Q3

                     42        M207                        M173                                        R*

                     43        M173                        SRY10831b, P25                          R1*

                     44        P25                                                                            R1b*

                     45        SRY10831b                                                                    R1a*

Semino          Eu1      M13                                                                           A3b2

(2000)           Eu2      M2                                                                             E3a

                     Eu3      SRY4064                     M2, M35                                   E*(xE3a,E3b)

                     Eu4      M35                                                                           E3b

                     Eu5      YAP                         SRY4064                                     DE*(xE)

                     Eu6      RPS4Y711                                                                   C

                     Eu7      M170                        M26                                          I*(xI1b2)

                     Eu8      M26                                                                           I1b2

                     Eu9      M172                                                                         J2

                     Eu10    M89                          M170, M172, M201,

                                                                  M69, M9                                   F*(xI,J2,G,H,K)

                     Eu11    M201                                                                         G

                     Eu12    M69                                                                           H

                     Eu13    Tat                            M178                                        N3*

                     Eu14    M178                                                                         N3a

                     Eu15    M70                                                                           K2

                     Eu16    M9                            M70, Tat, M11, M45                K*(xK2, N3,L,P)

                     Eu17    M11                                                                           L

                     Eu18    M173                        M17                                          R1*(xR1a1)

                     Eu19    M17                                                                           R1a1

                     Eu20    M45                          M173, M124, M3                     P*(xR1,Q3,P1)

                     Eu21    M124                                                                         P1

                     Eu22    M3                                                                             Q3

Su                 H1                                        M89, YAP                                Y*(xDE,F)

(1999)           H2       YAP                         M15                                          DE*(xD1)

                     H3       M15                                                                           D1

                     H4       M89                          M9                                            F*(xK)

                     H5       M9                            M122, M119, M95,

                                                                  M45, M5                                   K*(xO3,O1,O2a,P,M)

                     H6       M122                        M7, M134                                 O3*(xO3d,O3e)

                     H7       M7                                                                             O3d

                     H8       M134                                                                         O3e

                     H9       M119                        M50                                          O1*(xO1b)

                     H10     M50                                                                           O1b

                     H11     M95                          M88                                          O2a*

                     H12     M88                                                                           O2a1

                     H13     M120                                                                         Q1

                     H14     M45                          M120, M3, M17                       P*(xQ1,Q3,R1a1)

                     H15     M3                                                                             Q3

                     H16     M17                                                                           R1a1

                     H17     M5                                                                             M

Capelli           A                                          SRY10831a                                   Y*(xBR)

(2001)           B          SRY10831a                  RPS4Y711, M9                           BR*(xC,K)

                     C         RPS4Y711                                                                   C

                     D         92R7                                                                          P

                     E          M4                                                                             M

                     F          M9                            92R7, M4, M175                      K*(xP,M,O)

                     G         M95                                                                           O2a

                     H         M119                                                                         O1

                     I           M175                        M95, M119, M122                   O*(xO1,O2a,O3)

                     L          M122                                                                         O3

                                                                                                                                                             

Lineages defined solely by the presence of a derived marker are monophyletic. Lineages defined by the presence of a derived marker and the absence of the derived state at other markers are potentially paraphyletic and under the present nomenclature are differentiated by the * symbol, unless they are known to monophyletic.